RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 WDR66Q8TBY9 1149 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 ZDHHC1Q8WTX9 485 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 STRBPQ96SI9 672 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 CEP44Q9C0F1 390 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 AS3MTQ9HBK9 375 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 LUZP4Q9P127 313 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 ZNRF3Q9ULT6 936 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 BCS1LQ9Y276 419 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 DAAM1Q9Y4D1 1078 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 IQCA1LA6NCM1 817 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ANP32CO43423 234 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ADCY3O60266 1144 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 BRINP1O60477 761 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ABLIM3O94929 683 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 POLR3DP05423 398 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ARAFP10398 606 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 SNRPBP14678 240 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ZSCAN20P17040 1043 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 MCM4P33991 863 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 PPM1FP49593 454 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ZNF280AP59817 542 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 CBX2Q14781 532 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 C4orf17Q53FE4 359 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 SLC27A3Q5K4L6 730 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 SH3PXD2AQ5TCZ1 1133 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 FBXW10Q5XX13 1052 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 TOGARAM2Q6ZUX3 1019 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 EEPD1Q7L9B9 569 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 LYSMD3Q7Z3D4 306 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 STRA8Q7Z7C7 330 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ZBTB46Q86UZ6 589 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 MORC1Q86VD1 984 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 TRIM42Q8IWZ5 723 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 LRRC47Q8N1G4 583 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 CCDC89Q8N998 374 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 RHBDD1Q8TEB9 315 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 JPH3Q8WXH2 748 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 DDX1Q92499 740 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 CDC5LQ99459 802 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 EPN3Q9H201 632 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 ATG3Q9NT62 314 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 PGAP2Q9UHJ9 254 aa5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 TPX2Q9ULW0 747 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 NOB1Q9ULX3 412 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-201ENST00000578664 FIGNL2A6NMB9 653 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 TGFBR3LH3BV60 316 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 GPR39O43194 453 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 SLC26A4O43511 780 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 ZRANB2O95218 330 aaKnown RBP eCLIP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 VDRP11473 427 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 TYRP1P17643 537 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 TFE3P19532 575 aaPredicted RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 DDIT3P35638 169 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 SARSP49591 514 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 POU4F2Q12837 409 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 MPP2Q14168 576 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 DHCR24Q15392 516 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 MAP3K11Q16584 847 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 CWF19L2Q2TBE0 894 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 IER5Q5VY09 327 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 IL31Q6EBC2 164 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 RINLQ6ZS11 566 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 PODNQ7Z5L7 613 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 LRRTM3Q86VH5 581 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 LSRQ86X29 649 aaPredicted RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 PPM1KQ8N3J5 372 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 ANKRD42Q8N9B4 389 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 GATAD2BQ8WXI9 593 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 KISS1RQ969F8 398 aaPredicted RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 TRMT2BQ96GJ1 504 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 ELAC2Q9BQ52 826 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 SELENOOQ9BVL4 669 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 TARS2Q9BW92 718 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 NIFKQ9BYG3 293 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 EHD4Q9H223 541 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 NCOA5Q9HCD5 579 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 TCF7L1Q9HCS4 588 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 CABP1Q9NZU7 370 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 PUF60Q9UHX1 559 aaKnown RBP5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 CUX2O14529 1486 aa5.31□□□□□ -1.56
GAPLINC-201ENST00000578664 SENP3-EIF4A1A0A087X0R7 540 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 SOBPA7XYQ1 873 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 PRPF3O43395 683 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 NEFMP07197 916 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 POU3F2P20265 443 aaPredicted RBP5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 CCNFP41002 786 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 FCGRTP55899 365 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 MAP7Q14244 749 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 MINDY4Q4G0A6 757 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 GNASQ5JWF2 1037 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 TTLL5Q6EMB2 1281 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 TMEM214Q6NUQ4 689 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 C6orf15Q6UXA7 325 aaPredicted RBP5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 PRICKLE2Q7Z3G6 844 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 ZNF354CQ86Y25 554 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 C7orf43Q8WVR3 580 aa5.3□□□□□ -1.56
GAPLINC-201ENST00000578664 ATXN2LQ8WWM7 1075 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms