RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 RIOK1Q9BRS2 568 aaKnown RBP14.04□□□□□ -0.16
GGA3-204ENST00000578208 DOCK1Q14185 1865 aa14.04□□□□□ -0.16
GGA3-204ENST00000578208 FAM196BA6NMK8 535 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 GPR25O00155 361 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 MX1P20591 662 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 ADD2P35612 726 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 TAF1CQ15572 869 aaPredicted RBP14.03□□□□□ -0.16
GGA3-204ENST00000578208 NOM1Q5C9Z4 860 aaKnown RBP14.03□□□□□ -0.16
GGA3-204ENST00000578208 IFFO2Q5TF58 517 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 TSHZ3Q63HK5 1081 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 FOXP4Q8IVH2 680 aaPredicted RBP14.03□□□□□ -0.16
GGA3-204ENST00000578208 DDRGK1Q96HY6 314 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 ZHX2Q9Y6X8 837 aa14.03□□□□□ -0.16
GGA3-204ENST00000578208 CDK5RAP2Q96SN8 1893 aa14.02□□□□□ -0.16
GGA3-204ENST00000578208 TCRBV5S4A2TA0A5A2 114 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 CXCL11O14625 94 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 FKTNO75072 461 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 GLRX3O76003 335 aaKnown RBP14.02□□□□□ -0.17
GGA3-204ENST00000578208 MBD4O95243 580 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 PTPRAP18433 802 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 DGKZQ13574 1117 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 UBE3CQ15386 1083 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 TTC6Q86TZ1 520 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 AMOTL1Q8IY63 956 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 KBTBD3Q8NAB2 608 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 ZNF296Q8WUU4 475 aaPredicted RBP14.02□□□□□ -0.17
GGA3-204ENST00000578208 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 ZFYVE28Q9HCC9 887 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 ZCCHC17Q9NP64 241 aaKnown RBP14.02□□□□□ -0.17
GGA3-204ENST00000578208 KCNH4Q9UQ05 1017 aa14.02□□□□□ -0.17
GGA3-204ENST00000578208 NAV1Q8NEY1 1877 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
GGA3-204ENST00000578208 SLURP2P0DP57 97 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 CAP2P40123 477 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 CRHR2Q13324 411 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 FASTKD5Q7L8L6 764 aaKnown RBP14.01□□□□□ -0.17
GGA3-204ENST00000578208 CTU1Q7Z7A3 348 aaKnown RBP14.01□□□□□ -0.17
GGA3-204ENST00000578208 FAM43AQ8N2R8 423 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 LCORLQ8N3X6 602 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 PTPN18Q99952 460 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 ARMT1Q9H993 441 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 AS3MTQ9HBK9 375 aa14.01□□□□□ -0.17
GGA3-204ENST00000578208 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
GGA3-204ENST00000578208 MYH7P12883 1935 aa14□□□□□ -0.17
GGA3-204ENST00000578208 BTBD19C9JJ37 291 aa14□□□□□ -0.17
GGA3-204ENST00000578208 ZFYP08048 801 aaPredicted RBP14□□□□□ -0.17
GGA3-204ENST00000578208 ASNSP08243 561 aa14□□□□□ -0.17
GGA3-204ENST00000578208 ANKRD23Q86SG2 305 aa14□□□□□ -0.17
GGA3-204ENST00000578208 GINM1Q9NU53 330 aa14□□□□□ -0.17
GGA3-204ENST00000578208 SERPINB13Q9UIV8 391 aa14□□□□□ -0.17
GGA3-204ENST00000578208 MYH1P12882 1939 aa14□□□□□ -0.17
GGA3-204ENST00000578208 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 USP17L5A8MUK1 530 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 CAPN15O75808 1086 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 GADL1Q6ZQY3 521 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 METTL16Q86W50 562 aaKnown RBP13.99□□□□□ -0.17
GGA3-204ENST00000578208 OTUD7AQ8TE49 926 aaPredicted RBP13.99□□□□□ -0.17
GGA3-204ENST00000578208 SDR42E1Q8WUS8 393 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 ERO1AQ96HE7 468 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 FSD1Q9BTV5 496 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 MCOLN1Q9GZU1 580 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 EHD4Q9H223 541 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 R3HDMLQ9H3Y0 253 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 ATP8A2Q9NTI2 1148 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 MCM9Q9NXL9 1143 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 SIPA1L1O43166 1804 aa13.99□□□□□ -0.17
GGA3-204ENST00000578208 A0A0G2JLL6 359 aaPredicted RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 PDHXO00330 501 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 RNF113AO15541 343 aaKnown RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 PRRT2Q7Z6L0 340 aaPredicted RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 CCDC84Q86UT8 332 aaPredicted RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 PI4K2BQ8TCG2 481 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 APPBP2Q92624 585 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 DNAJC18Q9H819 358 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 DCP1AQ9NPI6 582 aaPredicted RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 ATAD5Q96QE3 1844 aa13.98□□□□□ -0.17
GGA3-204ENST00000578208 DDX60LQ5H9U9 1706 aaKnown RBP13.98□□□□□ -0.17
GGA3-204ENST00000578208 GDF11O95390 407 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 SP3Q02447 781 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 KIF22Q14807 665 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 ARHGEF6Q15052 776 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 PKN2Q16513 984 aaKnown RBP13.97□□□□□ -0.17
GGA3-204ENST00000578208 SLFNL1Q499Z3 407 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 ABHD8Q96I13 439 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 PUS7LQ9H0K6 701 aaKnown RBP13.97□□□□□ -0.17
GGA3-204ENST00000578208 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
GGA3-204ENST00000578208 SALL3Q9BXA9 1300 aa13.96□□□□□ -0.17
GGA3-204ENST00000578208 PDE1AP54750 535 aa13.96□□□□□ -0.17
GGA3-204ENST00000578208 SPP2Q13103 211 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms