RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 FANCBQ8NB91 859 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 MRFAP1L1Q96HT8 127 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 UBAC1Q9BSL1 405 aa20.29■□□□□ 0.84
ERBB2-205ENST00000578199 COL5A3P25940 1745 aaPredicted RBP20.29■□□□□ 0.84
ERBB2-205ENST00000578199 TIAM2Q8IVF5 1701 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 CDC25BP30305 580 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 TOB1P50616 345 aaPredicted RBP20.28■□□□□ 0.84
ERBB2-205ENST00000578199 AMIGO3Q86WK7 504 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 CRACR2BQ8N4Y2 399 aaPredicted RBP20.28■□□□□ 0.84
ERBB2-205ENST00000578199 TNKSO95271 1327 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 PPP6R2O75170 966 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 MMP1P03956 469 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 ATP2B1P20020 1258 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 GRIN1Q05586 938 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 PNOCQ13519 176 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 NOSTRINQ8IVI9 506 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 LRRC8AQ8IWT6 810 aa20.28■□□□□ 0.84
ERBB2-205ENST00000578199 BAZ2AQ9UIF9 1905 aaKnown RBP20.28■□□□□ 0.84
ERBB2-205ENST00000578199 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.84
ERBB2-205ENST00000578199 OXER1Q8TDS5 423 aa20.27■□□□□ 0.84
ERBB2-205ENST00000578199 RNF41Q9H4P4 317 aaPredicted RBP20.27■□□□□ 0.84
ERBB2-205ENST00000578199 HPSEQ9Y251 543 aa20.27■□□□□ 0.84
ERBB2-205ENST00000578199 STK36Q9NRP7 1315 aa20.27■□□□□ 0.84
ERBB2-205ENST00000578199 DYNC1I1O14576 645 aa20.27■□□□□ 0.84
ERBB2-205ENST00000578199 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
ERBB2-205ENST00000578199 C16orf45Q96MC5 204 aaPredicted RBP20.27■□□□□ 0.84
ERBB2-205ENST00000578199 NLRP12P59046 1061 aa20.26■□□□□ 0.83
ERBB2-205ENST00000578199 LONRF3Q496Y0 759 aa20.26■□□□□ 0.83
ERBB2-205ENST00000578199 PRIMPOLQ96LW4 560 aa20.26■□□□□ 0.83
ERBB2-205ENST00000578199 MYH2Q9UKX2 1941 aa20.26■□□□□ 0.83
ERBB2-205ENST00000578199 SEC23AQ15436 765 aa20.26■□□□□ 0.83
ERBB2-205ENST00000578199 CASZ1Q86V15 1759 aa20.26■□□□□ 0.83
ERBB2-205ENST00000578199 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
ERBB2-205ENST00000578199 FOXN1O15353 648 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 RPS8P62241 208 aaKnown RBP20.25■□□□□ 0.83
ERBB2-205ENST00000578199 CHAF1AQ13111 956 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-205ENST00000578199 SLC4A8Q2Y0W8 1093 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 RESP18Q5W5W9 173 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 ENAHQ8N8S7 591 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-205ENST00000578199 JMYQ8N9B5 988 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 ESR2Q92731 530 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 SHISA4Q96DD7 197 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 LTBP4Q8N2S1 1624 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 NBPF5PQ86XG9 351 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-205ENST00000578199 WASF1Q92558 559 aa20.25■□□□□ 0.83
ERBB2-205ENST00000578199 GNPATO15228 680 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 RBM6P78332 1123 aaKnown RBP20.24■□□□□ 0.83
ERBB2-205ENST00000578199 SAFBQ15424 915 aaKnown RBP eCLIP20.24■□□□□ 0.83
ERBB2-205ENST00000578199 TXNRD3Q86VQ6 643 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 TMTC2Q8N394 836 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 RGS22Q8NE09 1264 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.24■□□□□ 0.83
ERBB2-205ENST00000578199 AATFQ9NY61 560 aaKnown RBP eCLIP20.24■□□□□ 0.83
ERBB2-205ENST00000578199 PCDHB6Q9Y5E3 794 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 A0A1B0GUL6 1792 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 USP17L12C9JPN9 530 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 USP17L21D6R901 530 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 DEXIO95424 95 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 MECOMQ03112 1051 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 FOXP4Q8IVH2 680 aaPredicted RBP20.24■□□□□ 0.83
ERBB2-205ENST00000578199 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 IFNKQ9P0W0 207 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 ANAPC4Q9UJX5 808 aa20.24■□□□□ 0.83
ERBB2-205ENST00000578199 FAM205CA6NFA0 338 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 SMC2O95347 1197 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 LMOD1P29536 600 aaPredicted RBP20.23■□□□□ 0.83
ERBB2-205ENST00000578199 PRDX5P30044 214 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 NCAPHQ15003 741 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 METTL16Q86W50 562 aaKnown RBP20.23■□□□□ 0.83
ERBB2-205ENST00000578199 NSUN4Q96CB9 384 aaKnown RBP20.23■□□□□ 0.83
ERBB2-205ENST00000578199 ZSCAN10Q96SZ4 725 aaPredicted RBP20.23■□□□□ 0.83
ERBB2-205ENST00000578199 ARID3AQ99856 593 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 XPO4Q9C0E2 1151 aaKnown RBP20.23■□□□□ 0.83
ERBB2-205ENST00000578199 KCNH3Q9ULD8 1083 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 USP27XA6NNY8 438 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 RIOK3O14730 519 aaKnown RBP20.23■□□□□ 0.83
ERBB2-205ENST00000578199 NMT2O60551 498 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 SLC10A5Q5PT55 438 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 FBXO33Q7Z6M2 555 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 CABP5Q9NP86 173 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 VPS54Q9P1Q0 977 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 NARFQ9UHQ1 456 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 NID2Q14112 1375 aa20.23■□□□□ 0.83
ERBB2-205ENST00000578199 CUTAO60888 179 aa20.22■□□□□ 0.83
ERBB2-205ENST00000578199 PLEKHA8P1O95397 391 aa20.22■□□□□ 0.83
ERBB2-205ENST00000578199 TIGD1Q96MW7 591 aa20.22■□□□□ 0.83
ERBB2-205ENST00000578199 CCDC196A0A1B0GTZ2 297 aa20.22■□□□□ 0.83
ERBB2-205ENST00000578199 ZPR1O75312 459 aa20.22■□□□□ 0.83
ERBB2-205ENST00000578199 ATP1A3P13637 1013 aa20.22■□□□□ 0.83
ERBB2-205ENST00000578199 KRI1Q8N9T8 703 aaKnown RBP20.22■□□□□ 0.83
ERBB2-205ENST00000578199 CNNM3Q8NE01 707 aa20.22■□□□□ 0.83
ERBB2-205ENST00000578199 CNTNAP4Q9C0A0 1308 aa20.21■□□□□ 0.83
ERBB2-205ENST00000578199 SKILP12757 684 aa20.21■□□□□ 0.83
ERBB2-205ENST00000578199 IFIT1BQ5T764 474 aaKnown RBP20.21■□□□□ 0.83
ERBB2-205ENST00000578199 BPIFA3Q9BQP9 254 aa20.21■□□□□ 0.83
ERBB2-205ENST00000578199 TUBE1Q9UJT0 475 aa20.21■□□□□ 0.83
ERBB2-205ENST00000578199 EP400Q96L91 3159 aa20.21■□□□□ 0.83
ERBB2-205ENST00000578199 CYP2D6P10635 497 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms