RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PRPF38BQ5VTL8 546 aaKnown RBP15.53■□□□□ 0.08
CCDC57-211ENST00000578187 FASTKD5Q7L8L6 764 aaKnown RBP15.53■□□□□ 0.08
CCDC57-211ENST00000578187 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
CCDC57-211ENST00000578187 PARK7Q99497 189 aaKnown RBP15.53■□□□□ 0.08
CCDC57-211ENST00000578187 ANTXR1Q9H6X2 564 aa15.53■□□□□ 0.08
CCDC57-211ENST00000578187 HOXD10P28358 340 aa15.52■□□□□ 0.08
CCDC57-211ENST00000578187 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.08
CCDC57-211ENST00000578187 BCL11AQ9H165 835 aa15.52■□□□□ 0.08
CCDC57-211ENST00000578187 RBBP6Q7Z6E9 1792 aaKnown RBP15.52■□□□□ 0.07
CCDC57-211ENST00000578187 CTNND1O60716 968 aaKnown RBP15.51■□□□□ 0.07
CCDC57-211ENST00000578187 BAG3O95817 575 aa15.51■□□□□ 0.07
CCDC57-211ENST00000578187 RHBDL3P58872 404 aa15.51■□□□□ 0.07
CCDC57-211ENST00000578187 TTF1Q15361 905 aaPredicted RBP15.51■□□□□ 0.07
CCDC57-211ENST00000578187 NAA16Q6N069 864 aaPredicted RBP15.51■□□□□ 0.07
CCDC57-211ENST00000578187 TMED8Q6PL24 325 aaPredicted RBP15.51■□□□□ 0.07
CCDC57-211ENST00000578187 ECHDC1Q9NTX5 307 aa15.51■□□□□ 0.07
CCDC57-211ENST00000578187 PTCH2Q9Y6C5 1203 aa15.51■□□□□ 0.07
CCDC57-211ENST00000578187 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
CCDC57-211ENST00000578187 COL2A1P02458 1487 aaPredicted RBP15.51■□□□□ 0.07
CCDC57-211ENST00000578187 DDX60LQ5H9U9 1706 aaKnown RBP15.51■□□□□ 0.07
CCDC57-211ENST00000578187 DOCK1Q14185 1865 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 ATRNL1Q5VV63 1379 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 PHF20L1A8MW92 1017 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 IDH1O75874 414 aaKnown RBP15.5■□□□□ 0.07
CCDC57-211ENST00000578187 PLCG2P16885 1265 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 PTPRAP18433 802 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
CCDC57-211ENST00000578187 SLC4A8Q2Y0W8 1093 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 ADGRA1Q86SQ6 560 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 SMC5Q8IY18 1101 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 DNAJC2Q99543 621 aaKnown RBP15.5■□□□□ 0.07
CCDC57-211ENST00000578187 HAUS7Q99871 368 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 RWDD1Q9H446 243 aaPredicted RBP15.5■□□□□ 0.07
CCDC57-211ENST00000578187 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCDC57-211ENST00000578187 CPA4Q9UI42 421 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 NAV1Q8NEY1 1877 aa15.5■□□□□ 0.07
CCDC57-211ENST00000578187 SALL3Q9BXA9 1300 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 DDTLA6NHG4 134 aaPredicted RBP15.49■□□□□ 0.07
CCDC57-211ENST00000578187 GOLIM4O00461 696 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 TBC1D12O60347 775 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 FMNL1O95466 1100 aaPredicted RBP15.49■□□□□ 0.07
CCDC57-211ENST00000578187 MAP3K10Q02779 954 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 MAP3K12Q12852 859 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 C17orf99Q6UX52 265 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 GADL1Q6ZQY3 521 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 TEX11Q8IYF3 940 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 GPATCH3Q96I76 525 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 ZNF333Q96JL9 665 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 BOLA2Q9H3K6 86 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 DDX4Q9NQI0 724 aaKnown RBP15.49■□□□□ 0.07
CCDC57-211ENST00000578187 PAG1Q9NWQ8 432 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 MYH1P12882 1939 aa15.49■□□□□ 0.07
CCDC57-211ENST00000578187 TTC41PQ6P2S7 1318 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 A0A0G2JLL6 359 aaPredicted RBP15.48■□□□□ 0.07
CCDC57-211ENST00000578187 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 IGHDP01880 384 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 PSMC4P43686 418 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 PPP4CP60510 307 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 SH3BP5LQ7L8J4 393 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 PRRT2Q7Z6L0 340 aaPredicted RBP15.48■□□□□ 0.07
CCDC57-211ENST00000578187 RAET1EQ8TD07 263 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 EDC3Q96F86 508 aaKnown RBP15.48■□□□□ 0.07
CCDC57-211ENST00000578187 TRIM34Q9BYJ4 488 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
CCDC57-211ENST00000578187 SLC45A1Q9Y2W3 748 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 HTTP42858 3142 aa15.48■□□□□ 0.07
CCDC57-211ENST00000578187 CYP7A1P22680 504 aa15.47■□□□□ 0.07
CCDC57-211ENST00000578187 FCGRTP55899 365 aa15.47■□□□□ 0.07
CCDC57-211ENST00000578187 ANKRD45Q5TZF3 282 aa15.47■□□□□ 0.07
CCDC57-211ENST00000578187 MAGEB6Q8N7X4 407 aa15.47■□□□□ 0.07
CCDC57-211ENST00000578187 OTUD7AQ8TE49 926 aaPredicted RBP15.47■□□□□ 0.07
CCDC57-211ENST00000578187 SMCR8Q8TEV9 937 aaPredicted RBP15.47■□□□□ 0.07
CCDC57-211ENST00000578187 ARHGAP39Q9C0H5 1083 aa15.47■□□□□ 0.07
CCDC57-211ENST00000578187 DHX36Q9H2U1 1008 aaKnown RBP15.47■□□□□ 0.07
CCDC57-211ENST00000578187 AATFQ9NY61 560 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC57-211ENST00000578187 HERC5Q9UII4 1024 aaKnown RBP15.47■□□□□ 0.07
CCDC57-211ENST00000578187 PNMA3Q9UL41 463 aa15.47■□□□□ 0.07
CCDC57-211ENST00000578187 AFG3L2Q9Y4W6 797 aa15.47■□□□□ 0.07
CCDC57-211ENST00000578187 CENPFP49454 3210 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 ATAD5Q96QE3 1844 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 TRIM75PA6NK02 468 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 ECM2O94769 699 aaPredicted RBP15.46■□□□□ 0.07
CCDC57-211ENST00000578187 SLC34A2O95436 690 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 PDE6AP16499 860 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 DSG3P32926 999 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 CAP1Q01518 475 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 CERS3Q8IU89 383 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 PI4K2BQ8TCG2 481 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 SH3RF3Q8TEJ3 882 aaPredicted RBP15.46■□□□□ 0.07
CCDC57-211ENST00000578187 SRRDQ9UH36 339 aa15.46■□□□□ 0.07
CCDC57-211ENST00000578187 MYPNQ86TC9 1320 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 TCRBV5S4A2TA0A5A2 114 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 CYP2C8P10632 490 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 MX1P20591 662 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 PABPC4Q13310 644 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCDC57-211ENST00000578187 MOGSQ13724 837 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 GPAT2Q6NUI2 795 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms