RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 MYOZ2Q9NPC6 264 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
CRLF3-202ENST00000577725 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
CRLF3-202ENST00000577725 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 G3V3G9 751 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 ZFYP08048 801 aaPredicted RBP12.04□□□□□ -0.48
CRLF3-202ENST00000577725 IL1R1P14778 569 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 CYP7A1P22680 504 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 PRDX5P30044 214 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 GJA8P48165 433 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 LRRFIP1Q32MZ4 808 aaKnown RBP12.04□□□□□ -0.48
CRLF3-202ENST00000577725 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 ZSCAN25Q6NSZ9 544 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 AGBL3Q8NEM8 1001 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 SLC10A4Q96EP9 437 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 MXD3Q9BW11 206 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 MAST2Q6P0Q8 1798 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
CRLF3-202ENST00000577725 MUC3AQ02505 3323 aa12.04□□□□□ -0.48
CRLF3-202ENST00000577725 GPAA1O43292 621 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 MBD4O95243 580 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 MCCP23508 829 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 GTF2IP78347 998 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 PRKG1Q13976 671 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 UBE3CQ15386 1083 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 ERICH6Q7L0X2 663 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 ADGRA1Q86SQ6 560 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 MIGA1Q8NAN2 632 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 GDF15Q99988 308 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 COA1Q9GZY4 146 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 ARMT1Q9H993 441 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
CRLF3-202ENST00000577725 DYNLL1P63167 89 aaKnown RBP12.02□□□□□ -0.49
CRLF3-202ENST00000577725 MECOMQ03112 1051 aa12.02□□□□□ -0.49
CRLF3-202ENST00000577725 MTFR1Q15390 333 aa12.02□□□□□ -0.49
CRLF3-202ENST00000577725 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
CRLF3-202ENST00000577725 WDR66Q8TBY9 1149 aa12.02□□□□□ -0.49
CRLF3-202ENST00000577725 WNK4Q96J92 1243 aa12.02□□□□□ -0.49
CRLF3-202ENST00000577725 ANGEL1Q9UNK9 670 aaKnown RBP12.02□□□□□ -0.49
CRLF3-202ENST00000577725 TAF6LQ9Y6J9 622 aa12.02□□□□□ -0.49
CRLF3-202ENST00000577725 FOXP2O15409 715 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
CRLF3-202ENST00000577725 LDHBP07195 334 aaKnown RBP12.01□□□□□ -0.49
CRLF3-202ENST00000577725 GJB1P08034 283 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
CRLF3-202ENST00000577725 HSPA4P34932 840 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 NAA16Q6N069 864 aaPredicted RBP12.01□□□□□ -0.49
CRLF3-202ENST00000577725 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
CRLF3-202ENST00000577725 TICAM2Q86XR7 235 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 LCORLQ8N3X6 602 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 MAP4K1Q92918 833 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 NSUN4Q96CB9 384 aaKnown RBP12.01□□□□□ -0.49
CRLF3-202ENST00000577725 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
CRLF3-202ENST00000577725 ZNF646O15015 1829 aaPredicted RBP12□□□□□ -0.49
CRLF3-202ENST00000577725 MYH2Q9UKX2 1941 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 F8W031 263 aaPredicted RBP12□□□□□ -0.49
CRLF3-202ENST00000577725 SLC27A2O14975 620 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 PRKAB2O43741 272 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 MFSD14BQ5SR56 506 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
CRLF3-202ENST00000577725 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
CRLF3-202ENST00000577725 CERS5Q8N5B7 392 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 GUCD1Q96NT3 240 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
CRLF3-202ENST00000577725 FAM205AQ6ZU69 1335 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 SALL1Q9NSC2 1324 aa12□□□□□ -0.49
CRLF3-202ENST00000577725 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 TNFRSF10AO00220 468 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 GNRH1P01148 92 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 PRMT2P55345 433 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 NECTIN1Q15223 517 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 NBPF9Q3BBW0 867 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 TDHQ8IZJ6 230 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 STRBPQ96SI9 672 aaKnown RBP11.99□□□□□ -0.49
CRLF3-202ENST00000577725 PTPN18Q99952 460 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
CRLF3-202ENST00000577725 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 EPB41L2O43491 1005 aaKnown RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 CD2BP2O95400 341 aaKnown RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 APPP05067 770 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 CPA1P15085 419 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 HAND2P61296 217 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 COL9A3Q14050 684 aaPredicted RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 KIF22Q14807 665 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 RABEP1Q15276 862 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 MAP3K11Q16584 847 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 ADCK5Q3MIX3 580 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 FAM109BQ6ICB4 259 aaPredicted RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 ZGPATQ8N5A5 531 aaKnown RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 KCNB2Q92953 911 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 DDRGK1Q96HY6 314 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 IPO9Q96P70 1041 aaKnown RBP11.98□□□□□ -0.49
CRLF3-202ENST00000577725 GMLQ99445 158 aa11.98□□□□□ -0.49
CRLF3-202ENST00000577725 UPF3BQ9BZI7 483 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms