RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 AOC3Q16853 763 aa6.52□□□□□ -1.37
TOP2A-203ENST00000577706 BHLHE22Q8NFJ8 381 aaPredicted RBP6.52□□□□□ -1.37
TOP2A-203ENST00000577706 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
TOP2A-203ENST00000577706 EMILIN2Q9BXX0 1053 aa6.52□□□□□ -1.37
TOP2A-203ENST00000577706 ATXN3LQ9H3M9 355 aa6.52□□□□□ -1.37
TOP2A-203ENST00000577706 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
TOP2A-203ENST00000577706 CELA3AP09093 270 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 ARHGAP27Q6ZUM4 889 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 ANKRD24Q8TF21 1146 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 MKNK2Q9HBH9 465 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 PARP2Q9UGN5 583 aa6.51□□□□□ -1.37
TOP2A-203ENST00000577706 TTLL4Q14679 1199 aa6.5□□□□□ -1.37
TOP2A-203ENST00000577706 ZC3H12AQ5D1E8 599 aaKnown RBP6.5□□□□□ -1.37
TOP2A-203ENST00000577706 FBXO33Q7Z6M2 555 aa6.5□□□□□ -1.37
TOP2A-203ENST00000577706 SMYD4Q8IYR2 804 aaPredicted RBP6.5□□□□□ -1.37
TOP2A-203ENST00000577706 CACNA2D2Q9NY47 1150 aa6.5□□□□□ -1.37
TOP2A-203ENST00000577706 TMEM265A0A087WTH1 108 aa6.49□□□□□ -1.37
TOP2A-203ENST00000577706 MESP2Q0VG99 397 aa6.49□□□□□ -1.37
TOP2A-203ENST00000577706 CCDC27Q2M243 656 aa6.49□□□□□ -1.37
TOP2A-203ENST00000577706 ANGEL2Q5VTE6 544 aaKnown RBP6.49□□□□□ -1.37
TOP2A-203ENST00000577706 TTF2Q9UNY4 1162 aaKnown RBP6.49□□□□□ -1.37
TOP2A-203ENST00000577706 SAMM50Q9Y512 469 aa6.49□□□□□ -1.37
TOP2A-203ENST00000577706 CSADQ9Y600 493 aa6.49□□□□□ -1.37
TOP2A-203ENST00000577706 U3KQE9 123 aa6.49□□□□□ -1.37
TOP2A-203ENST00000577706 LRRC10BA6NIK2 292 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 RNGTTO60942 597 aaKnown RBP6.48□□□□□ -1.37
TOP2A-203ENST00000577706 LEFTY1O75610 366 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 CEACAM5P06731 702 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 HCLS1P14317 486 aaPredicted RBP6.48□□□□□ -1.37
TOP2A-203ENST00000577706 OXCT1P55809 520 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 DAB2P98082 770 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 FGD1P98174 961 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 PCNX4Q63HM2 1172 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 LLGL2Q6P1M3 1020 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 SLC23A3Q6PIS1 610 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 SV2BQ7L1I2 683 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 ACSBG1Q96GR2 724 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 FAM161BQ96MY7 647 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 FAM53CQ9NYF3 392 aa6.48□□□□□ -1.37
TOP2A-203ENST00000577706 DCDC2CA8MYV0 355 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 TRIM37O94972 964 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 NEFMP07197 916 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 HNRNPUQ00839 825 aaKnown RBP eCLIP6.47□□□□□ -1.37
TOP2A-203ENST00000577706 PTPN11Q06124 597 aaPredicted RBP6.47□□□□□ -1.37
TOP2A-203ENST00000577706 LRRC14Q15048 493 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 MEI1Q5TIA1 1274 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 C12orf40Q86WS4 652 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 ZSWIM9Q86XI8 627 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 FLAD1Q8NFF5 587 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 DUSP23Q9BVJ7 150 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 CYP8B1Q9UNU6 501 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 PLAGL2Q9UPG8 496 aa6.47□□□□□ -1.37
TOP2A-203ENST00000577706 XPCQ01831 940 aaPredicted RBP6.46□□□□□ -1.38
TOP2A-203ENST00000577706 PSMD2Q13200 908 aa6.46□□□□□ -1.38
TOP2A-203ENST00000577706 CCDC85BQ15834 202 aaPredicted RBP6.46□□□□□ -1.38
TOP2A-203ENST00000577706 PPM1JQ5JR12 505 aa6.46□□□□□ -1.38
TOP2A-203ENST00000577706 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.46□□□□□ -1.38
TOP2A-203ENST00000577706 CTSHP09668 335 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 ERVK-24P63145 666 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 KCNMB1Q16558 191 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 MLANAQ16655 118 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 TTBK2Q6IQ55 1244 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 TMC4Q7Z404 712 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 RNF214Q8ND24 703 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 ISL2Q96A47 359 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 TOX2Q96NM4 488 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 PCDHA4Q9UN74 947 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
TOP2A-203ENST00000577706 ZNF503-AS2A6NEH8 195 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 ITIH2P19823 946 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 RAP1GAPP47736 663 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 RING1Q06587 406 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 INPP5AQ14642 412 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 MAP3K11Q16584 847 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 TNKS2Q9H2K2 1166 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 SSU72Q9NP77 194 aaKnown RBP6.44□□□□□ -1.38
TOP2A-203ENST00000577706 PRDM7Q9NQW5 492 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 PCDHB5Q9Y5E4 795 aa6.44□□□□□ -1.38
TOP2A-203ENST00000577706 ERCC3P19447 782 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 NTF4P34130 210 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 CDK8P49336 464 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 SCARA3Q6AZY7 606 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
TOP2A-203ENST00000577706 UBE3DQ7Z6J8 389 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 CILP2Q8IUL8 1156 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.43□□□□□ -1.38
TOP2A-203ENST00000577706 TOP6BLQ8N6T0 577 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 ASB11Q8WXH4 323 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 USP31Q70CQ4 1352 aa6.43□□□□□ -1.38
TOP2A-203ENST00000577706 ZNF865P0CJ78 1059 aaPredicted RBP6.42□□□□□ -1.38
TOP2A-203ENST00000577706 CFPP27918 469 aa6.42□□□□□ -1.38
TOP2A-203ENST00000577706 TAF1CQ15572 869 aaPredicted RBP6.42□□□□□ -1.38
TOP2A-203ENST00000577706 LRFN4Q6PJG9 635 aa6.42□□□□□ -1.38
TOP2A-203ENST00000577706 GAL3ST3Q96A11 431 aa6.42□□□□□ -1.38
TOP2A-203ENST00000577706 PPP1R16BQ96T49 567 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms