RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 ZNF333Q96JL9 665 aa18.25■□□□□ 0.51
MKS1-205ENST00000577315 CCDC8Q9H0W5 538 aaPredicted RBP18.25■□□□□ 0.51
MKS1-205ENST00000577315 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
MKS1-205ENST00000577315 PI4KBQ9UBF8 816 aa18.25■□□□□ 0.51
MKS1-205ENST00000577315 DDX19BQ9UMR2 479 aa18.25■□□□□ 0.51
MKS1-205ENST00000577315 SIPA1L1O43166 1804 aa18.24■□□□□ 0.51
MKS1-205ENST00000577315 HMMRO75330 724 aa18.24■□□□□ 0.51
MKS1-205ENST00000577315 PSMC4P43686 418 aa18.24■□□□□ 0.51
MKS1-205ENST00000577315 GADL1Q6ZQY3 521 aa18.24■□□□□ 0.51
MKS1-205ENST00000577315 ARHGAP39Q9C0H5 1083 aa18.24■□□□□ 0.51
MKS1-205ENST00000577315 HTTP42858 3142 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 BCRP11274 1271 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 CAP2P40123 477 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
MKS1-205ENST00000577315 FOXP4Q8IVH2 680 aaPredicted RBP18.23■□□□□ 0.51
MKS1-205ENST00000577315 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 SRRDQ9UH36 339 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 PNMA3Q9UL41 463 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 EXOC6BQ9Y2D4 811 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 DOCK3Q8IZD9 2030 aa18.23■□□□□ 0.51
MKS1-205ENST00000577315 LOC285556D6RIA3 1793 aa18.22■□□□□ 0.51
MKS1-205ENST00000577315 POTEFA5A3E0 1075 aa18.22■□□□□ 0.51
MKS1-205ENST00000577315 TRIM75PA6NK02 468 aa18.22■□□□□ 0.51
MKS1-205ENST00000577315 FMNL1O95466 1100 aaPredicted RBP18.22■□□□□ 0.51
MKS1-205ENST00000577315 AACSQ86V21 672 aa18.22■□□□□ 0.51
MKS1-205ENST00000577315 PROCA1Q8NCQ7 364 aaPredicted RBP18.22■□□□□ 0.51
MKS1-205ENST00000577315 TGFBRAP1Q8WUH2 860 aa18.22■□□□□ 0.51
MKS1-205ENST00000577315 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
MKS1-205ENST00000577315 TLR7Q9NYK1 1049 aaKnown RBP18.22■□□□□ 0.51
MKS1-205ENST00000577315 AGTPBP1Q9UPW5 1226 aa18.22■□□□□ 0.51
MKS1-205ENST00000577315 SLURP2P0DP57 97 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 CYP2C8P10632 490 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 FCGRTP55899 365 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 MAP3K12Q12852 859 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 PABPC4Q13310 644 aaKnown RBP eCLIP18.21■□□□□ 0.51
MKS1-205ENST00000577315 CLASRPQ8N2M8 674 aaKnown RBP18.21■□□□□ 0.51
MKS1-205ENST00000577315 ZNF280CQ8ND82 737 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 RHPN1Q8TCX5 695 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 KIF1BPQ96EK5 621 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 TRIM34Q9BYJ4 488 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 PIH1D3Q9NQM4 214 aaKnown RBP18.21■□□□□ 0.51
MKS1-205ENST00000577315 FLT1P17948 1338 aa18.21■□□□□ 0.51
MKS1-205ENST00000577315 FAM196BA6NMK8 535 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 USP17L5A8MUK1 530 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
MKS1-205ENST00000577315 HLA-DOAP06340 250 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 OSBPP22059 807 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 CYP7A1P22680 504 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
MKS1-205ENST00000577315 SLC4A8Q2Y0W8 1093 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 ADGRA1Q86SQ6 560 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
MKS1-205ENST00000577315 MAPKAPK5Q8IW41 473 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 RAET1EQ8TD07 263 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 SMCR8Q8TEV9 937 aaPredicted RBP18.2■□□□□ 0.5
MKS1-205ENST00000577315 TRIM47Q96LD4 638 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 CENPFP49454 3210 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 MYPNQ86TC9 1320 aa18.2■□□□□ 0.5
MKS1-205ENST00000577315 ASNSP08243 561 aa18.19■□□□□ 0.5
MKS1-205ENST00000577315 SPP2Q13103 211 aa18.19■□□□□ 0.5
MKS1-205ENST00000577315 CRACR2BQ8N4Y2 399 aaPredicted RBP18.19■□□□□ 0.5
MKS1-205ENST00000577315 ZBTB40Q9NUA8 1239 aa18.19■□□□□ 0.5
MKS1-205ENST00000577315 RCAN3Q9UKA8 241 aa18.19■□□□□ 0.5
MKS1-205ENST00000577315 COG6Q9Y2V7 657 aa18.19■□□□□ 0.5
MKS1-205ENST00000577315 RAB11FIP3O75154 756 aa18.18■□□□□ 0.5
MKS1-205ENST00000577315 CTGFP29279 349 aa18.18■□□□□ 0.5
MKS1-205ENST00000577315 SH3D19Q5HYK7 790 aa18.18■□□□□ 0.5
MKS1-205ENST00000577315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.18■□□□□ 0.5
MKS1-205ENST00000577315 EN2P19622 333 aaPredicted RBP18.17■□□□□ 0.5
MKS1-205ENST00000577315 GRK4P32298 578 aa18.17■□□□□ 0.5
MKS1-205ENST00000577315 USP5P45974 858 aa18.17■□□□□ 0.5
MKS1-205ENST00000577315 CCDC84Q86UT8 332 aaPredicted RBP18.17■□□□□ 0.5
MKS1-205ENST00000577315 MAGEB6Q8N7X4 407 aa18.17■□□□□ 0.5
MKS1-205ENST00000577315 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
MKS1-205ENST00000577315 WDR18Q9BV38 432 aa18.17■□□□□ 0.5
MKS1-205ENST00000577315 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
MKS1-205ENST00000577315 MYH7P12883 1935 aa18.16■□□□□ 0.5
MKS1-205ENST00000577315 C19orf81C9J6K1 198 aa18.16■□□□□ 0.5
MKS1-205ENST00000577315 IFIT2P09913 472 aaKnown RBP18.16■□□□□ 0.5
MKS1-205ENST00000577315 GCLCP48506 637 aaPredicted RBP18.16■□□□□ 0.5
MKS1-205ENST00000577315 DYNLL1P63167 89 aaKnown RBP18.16■□□□□ 0.5
MKS1-205ENST00000577315 FAM110CQ1W6H9 321 aa18.16■□□□□ 0.5
MKS1-205ENST00000577315 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.16■□□□□ 0.5
MKS1-205ENST00000577315 PALD1Q9ULE6 856 aa18.16■□□□□ 0.5
MKS1-205ENST00000577315 ECM2O94769 699 aaPredicted RBP18.15■□□□□ 0.5
MKS1-205ENST00000577315 HMGCS2P54868 508 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 UBXN2AP68543 259 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 RRP1BQ14684 758 aaKnown RBP18.15■□□□□ 0.5
MKS1-205ENST00000577315 TTC6Q86TZ1 520 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 SLAIN1Q8ND83 568 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 NKX2-3Q8TAU0 364 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 ANTXR1Q9H6X2 564 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 TMOD4Q9NZQ9 345 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 NAV1Q8NEY1 1877 aa18.15■□□□□ 0.5
MKS1-205ENST00000577315 MYH8P13535 1937 aa18.14■□□□□ 0.49
MKS1-205ENST00000577315 TNPO2O14787 897 aaKnown RBP18.14■□□□□ 0.49
MKS1-205ENST00000577315 TREML2Q5T2D2 321 aa18.14■□□□□ 0.49
MKS1-205ENST00000577315 MIGA1Q8NAN2 632 aa18.14■□□□□ 0.49
MKS1-205ENST00000577315 COA7Q96BR5 231 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms