RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 DDIT3P35638 169 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 EPS15P42566 896 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 RBM5P52756 815 aaKnown RBP eCLIP14.67□□□□□ -0.06
TSEN54-204ENST00000577197 KIF4BQ2VIQ3 1234 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 CDC42EP5Q6NZY7 148 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 TGFBRAP1Q8WUH2 860 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 ZBED3Q96IU2 234 aaPredicted RBP14.67□□□□□ -0.06
TSEN54-204ENST00000577197 ANGEL1Q9UNK9 670 aaKnown RBP14.67□□□□□ -0.06
TSEN54-204ENST00000577197 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.67□□□□□ -0.06
TSEN54-204ENST00000577197 NID2Q14112 1375 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 SHTN1A0MZ66 631 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 PRC1O43663 620 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 VEGFAP15692 232 aaPredicted RBP14.66□□□□□ -0.06
TSEN54-204ENST00000577197 EPHX2P34913 555 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 Q6ZUG5 572 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 USP50Q70EL3 339 aaPredicted RBP14.66□□□□□ -0.06
TSEN54-204ENST00000577197 PNMA8AQ86V59 439 aaPredicted RBP14.66□□□□□ -0.06
TSEN54-204ENST00000577197 RGS22Q8NE09 1264 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 USP40Q9NVE5 1235 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 SWAP70Q9UH65 585 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 NEDD4P46934 1319 aa14.66□□□□□ -0.06
TSEN54-204ENST00000577197 MINDY4BA8MYZ0 360 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 POTECB2RU33 542 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 WNT10BO00744 389 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 MYO1BO43795 1136 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 ANTXR2P58335 489 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 PPP2R5BQ15173 497 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 TBC1D10BQ4KMP7 808 aaPredicted RBP14.65□□□□□ -0.06
TSEN54-204ENST00000577197 C16orf86Q6ZW13 317 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 SAMD7Q7Z3H4 446 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 PRMT6Q96LA8 375 aaPredicted RBP14.65□□□□□ -0.06
TSEN54-204ENST00000577197 LLPHQ9BRT6 129 aaKnown RBP14.65□□□□□ -0.06
TSEN54-204ENST00000577197 OSBPL5Q9H0X9 879 aaPredicted RBP14.65□□□□□ -0.06
TSEN54-204ENST00000577197 TAF1DQ9H5J8 278 aaPredicted RBP14.65□□□□□ -0.06
TSEN54-204ENST00000577197 TCP11L1Q9NUJ3 509 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 TMOD2Q9NZR1 351 aa14.65□□□□□ -0.06
TSEN54-204ENST00000577197 UTRNP46939 3433 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 PLIN4Q96Q06 1357 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 SH2B2O14492 632 aaPredicted RBP14.64□□□□□ -0.07
TSEN54-204ENST00000577197 PFKFB2O60825 505 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 POLR3DP05423 398 aaPredicted RBP14.64□□□□□ -0.07
TSEN54-204ENST00000577197 FGD1P98174 961 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 CTDSPL2Q05D32 466 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 PPP4R3BQ5MIZ7 849 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 RBM26Q5T8P6 1007 aaKnown RBP14.64□□□□□ -0.07
TSEN54-204ENST00000577197 FAM83AQ86UY5 434 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 METTL16Q86W50 562 aaKnown RBP14.64□□□□□ -0.07
TSEN54-204ENST00000577197 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 IGDCC4Q8TDY8 1250 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 RRAGCQ9HB90 399 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 ADAMTSL1Q8N6G6 1762 aa14.64□□□□□ -0.07
TSEN54-204ENST00000577197 ERICH2A1L162 156 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 B4E1Z4 1266 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 DHX16O60231 1041 aaKnown RBP14.63□□□□□ -0.07
TSEN54-204ENST00000577197 KDM4AO75164 1064 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 HLA-DOAP06340 250 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 CPA1P15085 419 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 GABPAQ06546 454 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 ME3Q16798 604 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 MAPKAPK5Q8IW41 473 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 TRPM4Q8TD43 1214 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 ZC3H15Q8WU90 426 aaKnown RBP14.63□□□□□ -0.07
TSEN54-204ENST00000577197 ANKS1AQ92625 1134 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 BRF1Q92994 677 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 GTF3C6Q969F1 213 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 CHMP5Q9NZZ3 219 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 ZSWIM5Q9P217 1185 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 TPCN1Q9ULQ1 816 aa14.63□□□□□ -0.07
TSEN54-204ENST00000577197 EGFRP00533 1210 aa14.62□□□□□ -0.07
TSEN54-204ENST00000577197 YY1P25490 414 aa14.62□□□□□ -0.07
TSEN54-204ENST00000577197 HIRAP54198 1017 aaPredicted RBP14.62□□□□□ -0.07
TSEN54-204ENST00000577197 NBPF9Q3BBW0 867 aa14.62□□□□□ -0.07
TSEN54-204ENST00000577197 CYB5R4Q7L1T6 521 aa14.62□□□□□ -0.07
TSEN54-204ENST00000577197 FOXP4Q8IVH2 680 aaPredicted RBP14.62□□□□□ -0.07
TSEN54-204ENST00000577197 UBAC1Q9BSL1 405 aa14.62□□□□□ -0.07
TSEN54-204ENST00000577197 TDRD3Q9H7E2 651 aaKnown RBP14.62□□□□□ -0.07
TSEN54-204ENST00000577197 GPBP1L1Q9HC44 474 aaPredicted RBP14.62□□□□□ -0.07
TSEN54-204ENST00000577197 PCDHAC2Q9Y5I4 1007 aa14.62□□□□□ -0.07
TSEN54-204ENST00000577197 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 NUCB2P80303 420 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 TNFAIP1Q13829 316 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 DGKHQ86XP1 1220 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 ZNF526Q8TF50 670 aaPredicted RBP14.61□□□□□ -0.07
TSEN54-204ENST00000577197 CCDC17Q96LX7 622 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 MAP3K14Q99558 947 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 SLKQ9H2G2 1235 aaPredicted RBP14.61□□□□□ -0.07
TSEN54-204ENST00000577197 LY9Q9HBG7 655 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 NMRK2Q9NPI5 230 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 DDX4Q9NQI0 724 aaKnown RBP14.61□□□□□ -0.07
TSEN54-204ENST00000577197 PI4KBQ9UBF8 816 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 ZNF70Q9UC06 446 aaPredicted RBP14.61□□□□□ -0.07
TSEN54-204ENST00000577197 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 SERPINB13Q9UIV8 391 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 TACC3Q9Y6A5 838 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 PITPNM2Q9BZ72 1349 aa14.61□□□□□ -0.07
TSEN54-204ENST00000577197 IFIT3O14879 490 aaKnown RBP14.6□□□□□ -0.07
TSEN54-204ENST00000577197 PDCP20941 246 aa14.6□□□□□ -0.07
TSEN54-204ENST00000577197 PDIA3P30101 505 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms