RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 ZNF408Q9H9D4 720 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 MAP3K2Q9Y2U5 619 aa8.01□□□□□ -1.13
NUP88-212ENST00000576708 RTL9Q8NET4 1388 aa8□□□□□ -1.13
NUP88-212ENST00000576708 CAPN5O15484 640 aaPredicted RBP8□□□□□ -1.13
NUP88-212ENST00000576708 ECE2O60344 883 aa8□□□□□ -1.13
NUP88-212ENST00000576708 PDE8AO60658 829 aa8□□□□□ -1.13
NUP88-212ENST00000576708 STAU1O95793 577 aaKnown RBP8□□□□□ -1.13
NUP88-212ENST00000576708 PCCAP05165 728 aaPredicted RBP8□□□□□ -1.13
NUP88-212ENST00000576708 IGKV5-2P06315 115 aa8□□□□□ -1.13
NUP88-212ENST00000576708 HSPA8P11142 646 aaKnown RBP8□□□□□ -1.13
NUP88-212ENST00000576708 CTCFP49711 727 aaPredicted RBP8□□□□□ -1.13
NUP88-212ENST00000576708 CALD1Q05682 793 aaKnown RBP8□□□□□ -1.13
NUP88-212ENST00000576708 USP4Q13107 963 aa8□□□□□ -1.13
NUP88-212ENST00000576708 TBC1D10BQ4KMP7 808 aaPredicted RBP8□□□□□ -1.13
NUP88-212ENST00000576708 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
NUP88-212ENST00000576708 USP48Q86UV5 1035 aa8□□□□□ -1.13
NUP88-212ENST00000576708 CCDC191Q8NCU4 936 aa8□□□□□ -1.13
NUP88-212ENST00000576708 METTL22Q9BUU2 404 aaPredicted RBP8□□□□□ -1.13
NUP88-212ENST00000576708 CWC25Q9NXE8 425 aaPredicted RBP8□□□□□ -1.13
NUP88-212ENST00000576708 PGAP2Q9UHJ9 254 aa8□□□□□ -1.13
NUP88-212ENST00000576708 NOD1Q9Y239 953 aa8□□□□□ -1.13
NUP88-212ENST00000576708 PI4KAP2A4QPH2 592 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 ADM5C9JUS6 153 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 H7C1D1 291 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 ST8SIA5O15466 376 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 UFL1O94874 794 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 AVPP01185 164 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 CWF19L2Q2TBE0 894 aaKnown RBP7.99□□□□□ -1.13
NUP88-212ENST00000576708 PI4KAP1Q8N8J0 262 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 EYA3Q99504 573 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 ZC3H12CQ9C0D7 883 aaKnown RBP7.99□□□□□ -1.13
NUP88-212ENST00000576708 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 PRDM10Q9NQV6 1147 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 ANKIB1Q9P2G1 1089 aa7.99□□□□□ -1.13
NUP88-212ENST00000576708 ASTN2O75129 1339 aaPredicted RBP7.99□□□□□ -1.13
NUP88-212ENST00000576708 DDX58O95786 925 aaKnown RBP7.98□□□□□ -1.13
NUP88-212ENST00000576708 BMP1P13497 986 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 TWISTNBQ3B726 338 aaPredicted RBP7.98□□□□□ -1.13
NUP88-212ENST00000576708 CCDC152Q4G0S7 254 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 KSR2Q6VAB6 950 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 CDC37L1Q7L3B6 337 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 SAPCD2Q86UD0 394 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 DPF2Q92785 391 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 ZIC5Q96T25 663 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 VRTNQ9H8Y1 702 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 PODXL2Q9NZ53 605 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 CDHR2Q9BYE9 1310 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
NUP88-212ENST00000576708 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 AXIN1O15169 862 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 LZTS3O60299 673 aaPredicted RBP7.97□□□□□ -1.13
NUP88-212ENST00000576708 VIL1P09327 827 aaKnown RBP7.97□□□□□ -1.13
NUP88-212ENST00000576708 ECE1P42892 770 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 CTSWP56202 376 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 GTF2IP78347 998 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 RELBQ01201 579 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 MAP2K1Q02750 393 aaPredicted RBP7.97□□□□□ -1.13
NUP88-212ENST00000576708 ANKRD18AQ8IVF6 992 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 TTLL11Q8NHH1 800 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 ZNF594Q96JF6 807 aaPredicted RBP7.97□□□□□ -1.13
NUP88-212ENST00000576708 MXD3Q9BW11 206 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 GREM2Q9H772 168 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 ZNF395Q9H8N7 513 aaPredicted RBP7.97□□□□□ -1.13
NUP88-212ENST00000576708 MRS2Q9HD23 443 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 SCAF8Q9UPN6 1271 aaKnown RBP7.97□□□□□ -1.13
NUP88-212ENST00000576708 SCN9AQ15858 1988 aa7.97□□□□□ -1.13
NUP88-212ENST00000576708 H7C1W4 665 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 ADH1AP07327 375 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 RASA1P20936 1047 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 CLDN10P78369 228 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 KIF4BQ2VIQ3 1234 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 Q6ZVU0 165 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 UBE3BQ7Z3V4 1068 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 OGFOD1Q8N543 542 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 MEIOBQ8N635 442 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 ZNF775Q96BV0 537 aaPredicted RBP7.96□□□□□ -1.14
NUP88-212ENST00000576708 STK31Q9BXU1 1019 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 RAB6BQ9NRW1 208 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 MINPP1Q9UNW1 487 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 KIAA1024Q9UPX6 916 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 PCDHGA11Q9Y5H2 935 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 THSD7BQ9C0I4 1608 aa7.96□□□□□ -1.14
NUP88-212ENST00000576708 VAMP4O75379 141 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 HSP90B1P14625 803 aaKnown RBP7.95□□□□□ -1.14
NUP88-212ENST00000576708 ATP2B4P23634 1241 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 RPS12P25398 132 aaKnown RBP7.95□□□□□ -1.14
NUP88-212ENST00000576708 MAP2K2P36507 400 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 CASP7P55210 303 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 HUNKP57058 714 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 EXOSC9Q06265 439 aaKnown RBP7.95□□□□□ -1.14
NUP88-212ENST00000576708 NEXNQ0ZGT2 675 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
NUP88-212ENST00000576708 C6orf118Q5T5N4 469 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 CYP2U1Q7Z449 544 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
NUP88-212ENST00000576708 KDF1Q8NAX2 398 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms