RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NR5A1Q13285 461 aa20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 NOSTRINQ8IVI9 506 aa20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 SDR42E1Q8WUS8 393 aa20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 NOC4LQ9BVI4 516 aaKnown RBP20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 SAMSN1Q9NSI8 373 aaKnown RBP20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 TTC38Q5R3I4 469 aa20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 SND1Q7KZF4 910 aaKnown RBP eCLIP20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 ANKRD13CQ8N6S4 541 aa20.15■□□□□ 0.82
ATPAF1-214ENST00000576409 SEPT7Q16181 437 aaKnown RBP20.14■□□□□ 0.82
ATPAF1-214ENST00000576409 AFAP1L1Q8TED9 768 aa20.14■□□□□ 0.82
ATPAF1-214ENST00000576409 LRRIQ1Q96JM4 1722 aa20.14■□□□□ 0.82
ATPAF1-214ENST00000576409 TNNI2P48788 182 aa20.14■□□□□ 0.81
ATPAF1-214ENST00000576409 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
ATPAF1-214ENST00000576409 CRACR2BQ8N4Y2 399 aaPredicted RBP20.14■□□□□ 0.81
ATPAF1-214ENST00000576409 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
ATPAF1-214ENST00000576409 ROBO2Q9HCK4 1378 aa20.14■□□□□ 0.81
ATPAF1-214ENST00000576409 PDE4DQ08499 809 aa20.14■□□□□ 0.81
ATPAF1-214ENST00000576409 EFCAB8A8MWE9 144 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 M0R2C6 588 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 RAD51AP2Q09MP3 1159 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 PAK1Q13153 545 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 SLC39A14Q15043 492 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 FAM47AQ5JRC9 791 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 TTC19Q6DKK2 380 aaPredicted RBP20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 CERS3Q8IU89 383 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 RGS22Q8NE09 1264 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 INCENPQ9NQS7 918 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 VAV2P52735 878 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 UTP14CQ5TAP6 766 aaKnown RBP20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 CYP26C1Q6V0L0 522 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 ZNF287Q9HBT7 754 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 FAM207AQ9NSI2 230 aaPredicted RBP20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 TTF2Q9UNY4 1162 aaKnown RBP20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 NDUFAB1O14561 156 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 CASP14P31944 242 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
ATPAF1-214ENST00000576409 PSDA5PKW4 1024 aaPredicted RBP20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 CASP1P29466 404 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 TERF2Q15554 542 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 CFAP58Q5T655 872 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 PRM3Q9NNZ6 103 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 TMEM232C9JQI7 657 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 DYMQ7RTS9 669 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 JAKMIP2Q96AA8 810 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 DDX41Q9UJV9 622 aaKnown RBP20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 HGSO14964 777 aaPredicted RBP20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 ZMYM1Q5SVZ6 1142 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 MICALCLQ6ZW33 695 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 TMTC1Q8IUR5 882 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 NELFBQ8WX92 580 aa20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 PYM1Q9BRP8 204 aaKnown RBP20.12■□□□□ 0.81
ATPAF1-214ENST00000576409 GOLGA6L10A0A0M3HER8 536 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 GOLGA6CA6NDK9 693 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 PPP1R12BO60237 982 aaPredicted RBP20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 IGKV5-2P06315 115 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 GOLGA6DP0CG33 693 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 GOLGA6AQ9NYA3 693 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 SNAP23O00161 211 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 PNMA6AP0CW24 399 aaPredicted RBP20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 IL2RBP14784 551 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 SLC35F6Q8N357 371 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 PDE6AP16499 860 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 HNRNPH2P55795 449 aaKnown RBP20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 PICALMQ13492 652 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 AKNAD1Q5T1N1 836 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 ZNF654Q8IZM8 581 aa20.11■□□□□ 0.81
ATPAF1-214ENST00000576409 SOWAHDA6NJG2 315 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 OPA1O60313 960 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 PHKA1P46020 1223 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 MRPS25P82663 173 aaKnown RBP20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 KIF23Q02241 960 aaPredicted RBP20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 LONRF2Q1L5Z9 754 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 TRIM31Q9BZY9 425 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 NLRC4Q9NPP4 1024 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 RPAP1Q9BWH6 1393 aaPredicted RBP20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 A0A1W2PQ27 194 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 A0A1W2PQ64 194 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 A0A1W2PQD8 194 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 TRAF5O00463 557 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 APOA5Q6Q788 366 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 PARD6BQ9BYG5 372 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 EIF6P56537 245 aaKnown RBP20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 UBE4AQ14139 1066 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 WWC3Q9ULE0 1092 aa20.1■□□□□ 0.81
ATPAF1-214ENST00000576409 TXKP42681 527 aa20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 TBC1D7Q9P0N9 293 aa20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 MYO5CQ9NQX4 1742 aa20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 RAPGEF1Q13905 1077 aa20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 CALML3P27482 149 aa20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 ACRBPQ8NEB7 543 aa20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 AATFQ9NY61 560 aaKnown RBP eCLIP20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 ZNF710Q8N1W2 664 aa20.09■□□□□ 0.81
ATPAF1-214ENST00000576409 TYW1BQ6NUM6 668 aa20.08■□□□□ 0.81
ATPAF1-214ENST00000576409 IFNL3Q8IZI9 196 aa20.08■□□□□ 0.81
ATPAF1-214ENST00000576409 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms