RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 LAMB1P07942 1786 aa10.16□□□□□ -0.78
PRPF8-213ENST00000576407 SIPA1L1O43166 1804 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 TRAF5O00463 557 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 ZNF213O14771 459 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 SLC27A2O14975 620 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 CYP21A2P08686 494 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 SLURP2P0DP57 97 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 CTDSPL2Q05D32 466 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 FOXP4Q8IVH2 680 aaPredicted RBP10.15□□□□□ -0.78
PRPF8-213ENST00000576407 CDCA5Q96FF9 252 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 DYNLL2Q96FJ2 89 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 NBPF3Q9H094 633 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 EHD4Q9H223 541 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 SERPINB13Q9UIV8 391 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 ANAPC4Q9UJX5 808 aa10.15□□□□□ -0.78
PRPF8-213ENST00000576407 ROBO3Q96MS0 1386 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 FAM196BA6NMK8 535 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 ITGBL1O95965 494 aaPredicted RBP10.14□□□□□ -0.79
PRPF8-213ENST00000576407 HSPA4P34932 840 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 GABPAQ06546 454 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 SUPT20HL1Q3ZLR7 823 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 RNF20Q5VTR2 975 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 CREB3L3Q68CJ9 461 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 MIGA2Q7L4E1 593 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 METTL16Q86W50 562 aaKnown RBP10.14□□□□□ -0.79
PRPF8-213ENST00000576407 TBC1D10CQ8IV04 446 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 STK11IPQ8N1F8 1099 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 CRACR2BQ8N4Y2 399 aaPredicted RBP10.14□□□□□ -0.79
PRPF8-213ENST00000576407 SLC44A5Q8NCS7 719 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 HOOK2Q96ED9 719 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 DNAJC18Q9H819 358 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 HERC5Q9UII4 1024 aaKnown RBP10.14□□□□□ -0.79
PRPF8-213ENST00000576407 TAF6LQ9Y6J9 622 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 SSC5DA1L4H1 1573 aa10.14□□□□□ -0.79
PRPF8-213ENST00000576407 TBC1D12O60347 775 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 TOMM70O94826 608 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 SLC3A2P08195 630 aaKnown RBP10.13□□□□□ -0.79
PRPF8-213ENST00000576407 MCCP23508 829 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 CDK8P49336 464 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 MAP3K10Q02779 954 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 FMR1Q06787 632 aaKnown RBP eCLIP10.13□□□□□ -0.792e-8■■■■□ 26.2
PRPF8-213ENST00000576407 AKNAD1Q5T1N1 836 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 C16orf86Q6ZW13 317 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 SMC1BQ8NDV3 1235 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 RBM46Q8TBY0 533 aaKnown RBP10.13□□□□□ -0.79
PRPF8-213ENST00000576407 KCNB2Q92953 911 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 UPF2Q9HAU5 1272 aaKnown RBP10.13□□□□□ -0.79
PRPF8-213ENST00000576407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.13□□□□□ -0.79
PRPF8-213ENST00000576407 INCENPQ9NQS7 918 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 TACC3Q9Y6A5 838 aa10.13□□□□□ -0.79
PRPF8-213ENST00000576407 PRDM1O75626 825 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 FGRP09769 529 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 ZKSCAN1P17029 563 aaPredicted RBP10.12□□□□□ -0.79
PRPF8-213ENST00000576407 SHMT1P34896 483 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 NF2P35240 595 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 PDE4BQ07343 736 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 DCAF15Q66K64 600 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 MFSD6Q6ZSS7 791 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 STOX1Q6ZVD7 989 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 STAG1Q8WVM7 1258 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 C22orf23Q9BZE7 217 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 RNF41Q9H4P4 317 aaPredicted RBP10.12□□□□□ -0.79
PRPF8-213ENST00000576407 ZNF408Q9H9D4 720 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 SWAP70Q9UH65 585 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 TAOK2Q9UL54 1235 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 FZD1Q9UP38 647 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.12□□□□□ -0.79
PRPF8-213ENST00000576407 SNX14Q9Y5W7 946 aa10.12□□□□□ -0.79
PRPF8-213ENST00000576407 NEDD4P46934 1319 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 PHF20L1A8MW92 1017 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 E7EWF7 191 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 PPP1R12BO60237 982 aaPredicted RBP10.11□□□□□ -0.79
PRPF8-213ENST00000576407 PCP11498 1178 aaKnown RBP10.11□□□□□ -0.79
PRPF8-213ENST00000576407 RASA1P20936 1047 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 PRKG1Q13976 671 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 RRP1BQ14684 758 aaKnown RBP10.11□□□□□ -0.79
PRPF8-213ENST00000576407 TSGA10IPQ3SY00 556 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 TATDN1Q6P1N9 297 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 ZNF341Q9BYN7 854 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 MKNK2Q9HBH9 465 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 ZNF287Q9HBT7 754 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 TOMM22Q9NS69 142 aa10.11□□□□□ -0.79
PRPF8-213ENST00000576407 PASKQ96RG2 1323 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 ORC4O43929 436 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 USP2O75604 605 aaPredicted RBP10.1□□□□□ -0.79
PRPF8-213ENST00000576407 CELF2O95319 508 aaKnown RBP10.1□□□□□ -0.79
PRPF8-213ENST00000576407 RBM25P49756 843 aaKnown RBP10.1□□□□□ -0.79
PRPF8-213ENST00000576407 ANAPC15P60006 121 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 FSTL1Q12841 308 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 KRT32Q14532 448 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 ADCK5Q3MIX3 580 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 CERKLQ49MI3 558 aaPredicted RBP10.1□□□□□ -0.79
PRPF8-213ENST00000576407 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
PRPF8-213ENST00000576407 CST9Q5W186 159 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
PRPF8-213ENST00000576407 NKX2-3Q8TAU0 364 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 KLRG1Q96E93 195 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms