RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 USP5P45974 858 aa13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 HOOK2Q96ED9 719 aa13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 DCP1AQ9NPI6 582 aaPredicted RBP13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 ZNF112Q9UJU3 913 aa13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
SLC12A4-215ENST00000575857 UNCXA6NJT0 531 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 GSG1L2A8MUP6 293 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 NMIQ13287 307 aaPredicted RBP13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 DCAF15Q66K64 600 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 MIGA2Q7L4E1 593 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 HELLSQ9NRZ9 838 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 SAGE1Q9NXZ1 904 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 SLC4A4Q9Y6R1 1079 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 SIPA1L1O43166 1804 aa13.02□□□□□ -0.33
SLC12A4-215ENST00000575857 PHF20L1A8MW92 1017 aa13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 EVX2Q03828 476 aa13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 BMP2KLQ5H9B9 411 aa13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 ZNF341Q9BYN7 854 aa13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 DNAJC18Q9H819 358 aa13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 EPB41L4AQ9HCS5 686 aaPredicted RBP13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
SLC12A4-215ENST00000575857 FAM196BA6NMK8 535 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 CYP2D6P10635 497 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 GNAT2P19087 354 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
SLC12A4-215ENST00000575857 PLCD1P51178 756 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 MAP3K9P80192 1104 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 GABPAQ06546 454 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
SLC12A4-215ENST00000575857 RRP1BQ14684 758 aaKnown RBP13□□□□□ -0.33
SLC12A4-215ENST00000575857 MCMDC2Q4G0Z9 681 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 FOXP4Q8IVH2 680 aaPredicted RBP13□□□□□ -0.33
SLC12A4-215ENST00000575857 ANKRD13AQ8IZ07 590 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 EHD4Q9H223 541 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 IL25Q9H293 177 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 MCM9Q9NXL9 1143 aa13□□□□□ -0.33
SLC12A4-215ENST00000575857 PATL2C9JE40 543 aaKnown RBP12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 HIP1O00291 1037 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 TBC1D8O95759 1140 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 CHMLP26374 656 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 INPP5BP32019 993 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 VGLL4Q14135 290 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 NOL9Q5SY16 702 aaKnown RBP12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 C12orf60Q5U649 245 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 TTC6Q86TZ1 520 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 WRNIP1Q96S55 665 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 OTOFQ9HC10 1997 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
SLC12A4-215ENST00000575857 CCDC171Q6TFL3 1326 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 USP17L12C9JPN9 530 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 USP17L21D6R901 530 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 HLA-DOAP06340 250 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 SLC4A8Q2Y0W8 1093 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 IFNL3Q8IZI9 196 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 ZKSCAN4Q969J2 545 aaPredicted RBP12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 MYH1P12882 1939 aa12.98□□□□□ -0.33
SLC12A4-215ENST00000575857 POLR3DP05423 398 aaPredicted RBP12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 GJA5P36382 358 aa12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 ALX1Q15699 326 aa12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 SPRYD7Q5W111 196 aa12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 TATDN1Q6P1N9 297 aa12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 CTU1Q7Z7A3 348 aaKnown RBP12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 R3HDMLQ9H3Y0 253 aa12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
SLC12A4-215ENST00000575857 AK9Q5TCS8 1911 aa12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 CTNND1O60716 968 aaKnown RBP12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 HSPD1P10809 573 aaKnown RBP12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 SHMT1P34896 483 aa12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 JAG1P78504 1218 aa12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 SLC10A4Q96EP9 437 aa12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 WNK4Q96J92 1243 aa12.96□□□□□ -0.33
SLC12A4-215ENST00000575857 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms