RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MAPKAPK5Q8IW41 473 aa10.56□□□□□ -0.72
SMG6-216ENST00000575176 STAP2Q9UGK3 403 aa10.56□□□□□ -0.72
SMG6-216ENST00000575176 MYH4Q9Y623 1939 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 GABPAQ06546 454 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
SMG6-216ENST00000575176 SLC9C2Q5TAH2 1124 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
SMG6-216ENST00000575176 ERO1BQ86YB8 467 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
SMG6-216ENST00000575176 SCYL3Q8IZE3 742 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 FAM43AQ8N2R8 423 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 KBTBD3Q8NAB2 608 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 TGFBRAP1Q8WUH2 860 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
SMG6-216ENST00000575176 ROBO3Q96MS0 1386 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 COL11A1P12107 1806 aaPredicted RBP10.54□□□□□ -0.72
SMG6-216ENST00000575176 MANSC4A6NHS7 340 aaPredicted RBP10.54□□□□□ -0.72
SMG6-216ENST00000575176 TRPA1O75762 1119 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 PTPRAP18433 802 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 MX1P20591 662 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 IRX6P78412 446 aaPredicted RBP10.54□□□□□ -0.72
SMG6-216ENST00000575176 PPATQ06203 517 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 UBE3CQ15386 1083 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 AIDAQ96BJ3 306 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 SLC10A4Q96EP9 437 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 PUS7LQ9H0K6 701 aaKnown RBP10.54□□□□□ -0.72
SMG6-216ENST00000575176 EHD4Q9H223 541 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 PALD1Q9ULE6 856 aa10.54□□□□□ -0.72
SMG6-216ENST00000575176 DOCK3Q8IZD9 2030 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 PRKAB2O43741 272 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 MBD4O95243 580 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 PLCG2P16885 1265 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 SHMT1P34896 483 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 PLCD1P51178 756 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 PDE1AP54750 535 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 NUCB1Q02818 461 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 SREBF2Q12772 1141 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 CRHR2Q13324 411 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 GPAT2Q6NUI2 795 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 SDR42E1Q8WUS8 393 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 OSBP2Q969R2 916 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 ARMT1Q9H993 441 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 EPB41L4AQ9HCS5 686 aaPredicted RBP10.53□□□□□ -0.72
SMG6-216ENST00000575176 DCP1AQ9NPI6 582 aaPredicted RBP10.53□□□□□ -0.72
SMG6-216ENST00000575176 HERC5Q9UII4 1024 aaKnown RBP10.53□□□□□ -0.72
SMG6-216ENST00000575176 AFG3L2Q9Y4W6 797 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 CSADQ9Y600 493 aa10.53□□□□□ -0.72
SMG6-216ENST00000575176 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.73
SMG6-216ENST00000575176 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 BTBD19C9JJ37 291 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 M0R2C6 588 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 CTNND1O60716 968 aaKnown RBP10.52□□□□□ -0.73
SMG6-216ENST00000575176 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 BAG3O95817 575 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 CYP2D6P10635 497 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 PDE4AP27815 886 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 GUCY1A2P33402 732 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 CAP2P40123 477 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 DGKZQ13574 1117 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 SLC4A8Q2Y0W8 1093 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 TATDN1Q6P1N9 297 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.73
SMG6-216ENST00000575176 CERS3Q8IU89 383 aa10.52□□□□□ -0.73
SMG6-216ENST00000575176 ZNF296Q8WUU4 475 aaPredicted RBP10.52□□□□□ -0.73
SMG6-216ENST00000575176 DHX36Q9H2U1 1008 aaKnown RBP10.52□□□□□ -0.73
SMG6-216ENST00000575176 SAP30BPQ9UHR5 308 aaKnown RBP10.52□□□□□ -0.73
SMG6-216ENST00000575176 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 GPR25O00155 361 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 GTF2A2P52657 109 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 CCL15Q16663 113 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 LNPKQ9C0E8 428 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 OSBPL3Q9H4L5 887 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 PI4KBQ9UBF8 816 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 ZNF236Q9UL36 1845 aa10.51□□□□□ -0.73
SMG6-216ENST00000575176 FRMPD3Q5JV73 1810 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 CYP2D7A0A087X1C5 515 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 GLRX3O76003 335 aaKnown RBP10.5□□□□□ -0.73
SMG6-216ENST00000575176 CTGFP29279 349 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 INHBEP58166 350 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 ANKRD45Q5TZF3 282 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 ZSCAN29Q8IWY8 852 aaPredicted RBP10.5□□□□□ -0.73
SMG6-216ENST00000575176 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 APPBP2Q92624 585 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
SMG6-216ENST00000575176 SEC62Q99442 399 aaKnown RBP10.5□□□□□ -0.73
SMG6-216ENST00000575176 BCL11AQ9H165 835 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMG6-216ENST00000575176 ZCCHC17Q9NP64 241 aaKnown RBP10.5□□□□□ -0.73
SMG6-216ENST00000575176 ZBTB21Q9ULJ3 1066 aa10.5□□□□□ -0.73
SMG6-216ENST00000575176 GSG1L2A8MUP6 293 aa10.49□□□□□ -0.73
SMG6-216ENST00000575176 GDF11O95390 407 aa10.49□□□□□ -0.73
SMG6-216ENST00000575176 SNAPC2Q13487 334 aa10.49□□□□□ -0.73
SMG6-216ENST00000575176 ZMYM1Q5SVZ6 1142 aa10.49□□□□□ -0.73
SMG6-216ENST00000575176 TREML2Q5T2D2 321 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms