RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 C2orf69Q8N8R5 385 aa16.16■□□□□ 0.18
NDE1-209ENST00000574109 GBA2Q9HCG7 927 aaPredicted RBP16.16■□□□□ 0.18
NDE1-209ENST00000574109 SAP30BPQ9UHR5 308 aaKnown RBP16.16■□□□□ 0.18
NDE1-209ENST00000574109 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
NDE1-209ENST00000574109 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
NDE1-209ENST00000574109 FOXP2O15409 715 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 C12orf60Q5U649 245 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 CTR9Q6PD62 1173 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 ZNF408Q9H9D4 720 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 ANO2Q9NQ90 1003 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 GINM1Q9NU53 330 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 ANAPC4Q9UJX5 808 aa16.15■□□□□ 0.18
NDE1-209ENST00000574109 TMEM88BA6NKF7 163 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 USP17L21D6R901 530 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 APLP1P51693 650 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 IMMTQ16891 758 aaKnown RBP16.14■□□□□ 0.17
NDE1-209ENST00000574109 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 ZFPM1Q8IX07 1006 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 HHIPL1Q96JK4 782 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.14■□□□□ 0.17
NDE1-209ENST00000574109 SCAF8Q9UPN6 1271 aaKnown RBP16.14■□□□□ 0.17
NDE1-209ENST00000574109 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
NDE1-209ENST00000574109 PTPRFP10586 1907 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 FGAP02671 866 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 GABPAQ06546 454 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 PDE4BQ07343 736 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 PPARAQ07869 468 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 TTLL12Q14166 644 aaPredicted RBP16.13■□□□□ 0.17
NDE1-209ENST00000574109 C16orf86Q6ZW13 317 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 IL25Q9H293 177 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 RNF41Q9H4P4 317 aaPredicted RBP16.13■□□□□ 0.17
NDE1-209ENST00000574109 CREBZFQ9NS37 354 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 MYH4Q9Y623 1939 aa16.13■□□□□ 0.17
NDE1-209ENST00000574109 RNF20Q5VTR2 975 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 CDAN1Q8IWY9 1227 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.12■□□□□ 0.17
NDE1-209ENST00000574109 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 KLRG1Q96E93 195 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 WRNIP1Q96S55 665 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 TBC1D2Q9BYX2 928 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 ZNF112Q9UJU3 913 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 CSADQ9Y600 493 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
NDE1-209ENST00000574109 MINDY4BA8MYZ0 360 aa16.11■□□□□ 0.17
NDE1-209ENST00000574109 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
NDE1-209ENST00000574109 PLCD1P51178 756 aa16.11■□□□□ 0.17
NDE1-209ENST00000574109 NOL9Q5SY16 702 aaKnown RBP16.11■□□□□ 0.17
NDE1-209ENST00000574109 PRAMEF18Q5VWM3 479 aa16.11■□□□□ 0.17
NDE1-209ENST00000574109 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
NDE1-209ENST00000574109 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
NDE1-209ENST00000574109 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
NDE1-209ENST00000574109 TLL2Q9Y6L7 1015 aa16.11■□□□□ 0.17
NDE1-209ENST00000574109 PLIN4Q96Q06 1357 aa16.11■□□□□ 0.17
NDE1-209ENST00000574109 ZNF213O14771 459 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 ASNSP08243 561 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 CST9Q5W186 159 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 TATDN1Q6P1N9 297 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 STAG1Q8WVM7 1258 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 DNAJC18Q9H819 358 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 CNNM2Q9H8M5 875 aa16.1■□□□□ 0.17
NDE1-209ENST00000574109 RBM8AQ9Y5S9 174 aaKnown RBP16.1■□□□□ 0.17
NDE1-209ENST00000574109 LOC285556D6RIA3 1793 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 USP2O75604 605 aaPredicted RBP16.09■□□□□ 0.17
NDE1-209ENST00000574109 CYP2D6P10635 497 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 MCCP23508 829 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 SLC4A8Q2Y0W8 1093 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 LDLRAD1Q5T700 205 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 MIGA2Q7L4E1 593 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
NDE1-209ENST00000574109 PHF20L1A8MW92 1017 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 ORC4O43929 436 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 SHMT1P34896 483 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 CDK8P49336 464 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 HUNKP57058 714 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 PTH1RQ03431 593 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
NDE1-209ENST00000574109 AKNAD1Q5T1N1 836 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 PICK1Q9NRD5 415 aa16.08■□□□□ 0.16
NDE1-209ENST00000574109 ABT1Q9ULW3 272 aaKnown RBP16.08■□□□□ 0.16
NDE1-209ENST00000574109 CYP2D7A0A087X1C5 515 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 FGRP09769 529 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
NDE1-209ENST00000574109 HSPA6P17066 643 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 CAP2P40123 477 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
NDE1-209ENST00000574109 TRDNQ13061 729 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 VGLL4Q14135 290 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 KRT32Q14532 448 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
NDE1-209ENST00000574109 TMEM179Q6ZVK1 233 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms