RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CTGFP29279 349 aa25.87■■□□□ 1.73
CHRNB1-206ENST00000574054 ZNF512BQ96KM6 892 aaPredicted RBP25.86■■□□□ 1.73
CHRNB1-206ENST00000574054 PIH1D3Q9NQM4 214 aaKnown RBP25.86■■□□□ 1.73
CHRNB1-206ENST00000574054 SRRDQ9UH36 339 aa25.86■■□□□ 1.73
CHRNB1-206ENST00000574054 EXOC6BQ9Y2D4 811 aa25.86■■□□□ 1.73
CHRNB1-206ENST00000574054 MAST2Q6P0Q8 1798 aa25.85■■□□□ 1.73
CHRNB1-206ENST00000574054 OSBPP22059 807 aa25.85■■□□□ 1.73
CHRNB1-206ENST00000574054 HOXD10P28358 340 aa25.85■■□□□ 1.73
CHRNB1-206ENST00000574054 EAF2Q96CJ1 260 aaPredicted RBP25.85■■□□□ 1.73
CHRNB1-206ENST00000574054 BCRP11274 1271 aa25.84■■□□□ 1.73
CHRNB1-206ENST00000574054 ADGRA1Q86SQ6 560 aa25.84■■□□□ 1.73
CHRNB1-206ENST00000574054 MAPKAPK5Q8IW41 473 aa25.84■■□□□ 1.73
CHRNB1-206ENST00000574054 RAET1EQ8TD07 263 aa25.84■■□□□ 1.73
CHRNB1-206ENST00000574054 TGFBRAP1Q8WUH2 860 aa25.84■■□□□ 1.73
CHRNB1-206ENST00000574054 RBBP6Q7Z6E9 1792 aaKnown RBP25.84■■□□□ 1.73
CHRNB1-206ENST00000574054 FCGRTP55899 365 aa25.83■■□□□ 1.73
CHRNB1-206ENST00000574054 SMCR8Q8TEV9 937 aaPredicted RBP25.83■■□□□ 1.73
CHRNB1-206ENST00000574054 HERC5Q9UII4 1024 aaKnown RBP25.83■■□□□ 1.73
CHRNB1-206ENST00000574054 SLC45A1Q9Y2W3 748 aa25.83■■□□□ 1.73
CHRNB1-206ENST00000574054 MYPNQ86TC9 1320 aa25.83■■□□□ 1.73
CHRNB1-206ENST00000574054 IDH1O75874 414 aaKnown RBP25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 SLC34A2O95436 690 aa25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 MS4A1P11836 297 aa25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 PPP4CP60510 307 aa25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 AACSQ86V21 672 aa25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 ERC1Q8IUD2 1116 aa25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 DHX36Q9H2U1 1008 aaKnown RBP25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 PI4KBQ9UBF8 816 aa25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 AGTPBP1Q9UPW5 1226 aa25.82■■□□□ 1.72
CHRNB1-206ENST00000574054 CYP7A1P22680 504 aa25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 CAP2P40123 477 aa25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 SPP2Q13103 211 aa25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 RRP1BQ14684 758 aaKnown RBP25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 TRIM34Q9BYJ4 488 aa25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 NDUFB9Q9Y6M9 179 aa25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 FLT1P17948 1338 aa25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 PHIPQ8WWQ0 1821 aa25.81■■□□□ 1.72
CHRNB1-206ENST00000574054 TREML2Q5T2D2 321 aa25.8■■□□□ 1.72
CHRNB1-206ENST00000574054 ZNF280CQ8ND82 737 aa25.8■■□□□ 1.72
CHRNB1-206ENST00000574054 SAP30BPQ9UHR5 308 aaKnown RBP25.8■■□□□ 1.72
CHRNB1-206ENST00000574054 PTPRFP10586 1907 aa25.8■■□□□ 1.72
CHRNB1-206ENST00000574054 USP17L5A8MUK1 530 aa25.79■■□□□ 1.72
CHRNB1-206ENST00000574054 GRK4P32298 578 aa25.79■■□□□ 1.72
CHRNB1-206ENST00000574054 DYNLL1P63167 89 aaKnown RBP25.79■■□□□ 1.72
CHRNB1-206ENST00000574054 PRKCZQ05513 592 aa25.79■■□□□ 1.72
CHRNB1-206ENST00000574054 CRACR2BQ8N4Y2 399 aaPredicted RBP25.79■■□□□ 1.72
CHRNB1-206ENST00000574054 TBC1D2Q9BYX2 928 aa25.79■■□□□ 1.72
CHRNB1-206ENST00000574054 BIN2Q9UBW5 565 aaPredicted RBP25.79■■□□□ 1.72
CHRNB1-206ENST00000574054 APBB1O00213 710 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 IGSF3O75054 1194 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 HMGCS2P54868 508 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 HSP90AB4PQ58FF6 505 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 MIGA1Q8NAN2 632 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 IL1RAPL2Q9NP60 686 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 PNMA3Q9UL41 463 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 PALD1Q9ULE6 856 aa25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 MYO5AQ9Y4I1 1855 aaKnown RBP25.78■■□□□ 1.72
CHRNB1-206ENST00000574054 MTFR1Q15390 333 aa25.77■■□□□ 1.72
CHRNB1-206ENST00000574054 MAGEB6Q8N7X4 407 aa25.77■■□□□ 1.72
CHRNB1-206ENST00000574054 PROCA1Q8NCQ7 364 aaPredicted RBP25.77■■□□□ 1.72
CHRNB1-206ENST00000574054 AS3MTQ9HBK9 375 aa25.77■■□□□ 1.72
CHRNB1-206ENST00000574054 HLA-DOAP06340 250 aa25.76■■□□□ 1.71
CHRNB1-206ENST00000574054 ANKRD13CQ8N6S4 541 aa25.76■■□□□ 1.71
CHRNB1-206ENST00000574054 BCL11AQ9H165 835 aa25.76■■□□□ 1.71
CHRNB1-206ENST00000574054 COG6Q9Y2V7 657 aa25.76■■□□□ 1.71
CHRNB1-206ENST00000574054 ATAD5Q96QE3 1844 aa25.75■■□□□ 1.71
CHRNB1-206ENST00000574054 MAP3K12Q12852 859 aa25.75■■□□□ 1.71
CHRNB1-206ENST00000574054 RHPN1Q8TCX5 695 aa25.75■■□□□ 1.71
CHRNB1-206ENST00000574054 ANTXR1Q9H6X2 564 aa25.75■■□□□ 1.71
CHRNB1-206ENST00000574054 DNAJC18Q9H819 358 aa25.75■■□□□ 1.71
CHRNB1-206ENST00000574054 GABRQQ9UN88 632 aa25.75■■□□□ 1.71
CHRNB1-206ENST00000574054 TNPO2O14787 897 aaKnown RBP25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 GDF11O95390 407 aa25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 ASNSP08243 561 aa25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 USP5P45974 858 aa25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 PABPC4Q13310 644 aaKnown RBP eCLIP25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 FOXP4Q8IVH2 680 aaPredicted RBP25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 DDX19BQ9UMR2 479 aa25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 SIPA1L1O43166 1804 aa25.74■■□□□ 1.71
CHRNB1-206ENST00000574054 HMMRO75330 724 aa25.73■■□□□ 1.71
CHRNB1-206ENST00000574054 MTMR2Q13614 643 aa25.73■■□□□ 1.71
CHRNB1-206ENST00000574054 CERS3Q8IU89 383 aa25.73■■□□□ 1.71
CHRNB1-206ENST00000574054 CDK5RAP2Q96SN8 1893 aa25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 UBXN2AP68543 259 aa25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 JAG1P78504 1218 aa25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 SHROOM1Q2M3G4 852 aaPredicted RBP25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 METTL16Q86W50 562 aaKnown RBP25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 CLASRPQ8N2M8 674 aaKnown RBP25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 SLAIN1Q8ND83 568 aa25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 WDR18Q9BV38 432 aa25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 MGAMO43451 1857 aa25.72■■□□□ 1.71
CHRNB1-206ENST00000574054 CCL5P13501 91 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 FLT3LGP49771 235 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 FAM110CQ1W6H9 321 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 RPAP2Q8IXW5 612 aaPredicted RBP25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 KIF1BPQ96EK5 621 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 ASCC2Q9H1I8 757 aaPredicted RBP25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 ZBTB40Q9NUA8 1239 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 TMOD4Q9NZQ9 345 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 RCAN3Q9UKA8 241 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms