RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 DDX19BQ9UMR2 479 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 NDUFB9Q9Y6M9 179 aa12.24□□□□□ -0.45
RPA1-206ENST00000573994 GPR75-ASB3A0A0A6YYF3 556 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 CYP2E1P05181 493 aaPredicted RBP12.23□□□□□ -0.45
RPA1-206ENST00000573994 GSTO1P78417 241 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 ERO1BQ86YB8 467 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 ERC1Q8IUD2 1116 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 SIRT2Q8IXJ6 389 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 CFHR5Q9BXR6 569 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
RPA1-206ENST00000573994 ZBTB40Q9NUA8 1239 aa12.23□□□□□ -0.45
RPA1-206ENST00000573994 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
RPA1-206ENST00000573994 IGSF3O75054 1194 aa12.22□□□□□ -0.45
RPA1-206ENST00000573994 FKTNO75072 461 aa12.22□□□□□ -0.45
RPA1-206ENST00000573994 ENTPD3O75355 529 aa12.22□□□□□ -0.45
RPA1-206ENST00000573994 GTF2A2P52657 109 aa12.22□□□□□ -0.45
RPA1-206ENST00000573994 OTUD7BQ6GQQ9 843 aa12.22□□□□□ -0.45
RPA1-206ENST00000573994 NAA16Q6N069 864 aaPredicted RBP12.22□□□□□ -0.45
RPA1-206ENST00000573994 TEX11Q8IYF3 940 aa12.22□□□□□ -0.45
RPA1-206ENST00000573994 MAST2Q6P0Q8 1798 aa12.22□□□□□ -0.45
RPA1-206ENST00000573994 MYH2Q9UKX2 1941 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 HTTP42858 3142 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 TESPA1A2RU30 521 aaPredicted RBP12.21□□□□□ -0.45
RPA1-206ENST00000573994 FAM196BA6NMK8 535 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 IRF6O14896 467 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 HMMRO75330 724 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 LDHCP07864 332 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 PPIL2Q13356 520 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 ADGRA1Q86SQ6 560 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 FAM43AQ8N2R8 423 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
RPA1-206ENST00000573994 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 SH3RF3Q8TEJ3 882 aaPredicted RBP12.21□□□□□ -0.45
RPA1-206ENST00000573994 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
RPA1-206ENST00000573994 AATFQ9NY61 560 aaKnown RBP eCLIP12.21□□□□□ -0.45
RPA1-206ENST00000573994 ZNF112Q9UJU3 913 aa12.21□□□□□ -0.45
RPA1-206ENST00000573994 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 CETPP11597 493 aa12.2□□□□□ -0.46
RPA1-206ENST00000573994 EMP3P54852 163 aa12.2□□□□□ -0.46
RPA1-206ENST00000573994 SNAPC2Q13487 334 aa12.2□□□□□ -0.46
RPA1-206ENST00000573994 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 NOM1Q5C9Z4 860 aaKnown RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 NOL9Q5SY16 702 aaKnown RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 RPAP2Q8IXW5 612 aaPredicted RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 CD99L2Q8TCZ2 262 aa12.2□□□□□ -0.46
RPA1-206ENST00000573994 ZNF512BQ96KM6 892 aaPredicted RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 NOL10Q9BSC4 688 aaKnown RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.2□□□□□ -0.46
RPA1-206ENST00000573994 DOCK2Q92608 1830 aa12.2□□□□□ -0.46
RPA1-206ENST00000573994 LAMB1P07942 1786 aa12.2□□□□□ -0.46
RPA1-206ENST00000573994 PHF20L1A8MW92 1017 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 MAP4K4O95819 1239 aaPredicted RBP12.19□□□□□ -0.46
RPA1-206ENST00000573994 SOX10P56693 466 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 PPATQ06203 517 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 CCDC84Q86UT8 332 aaPredicted RBP12.19□□□□□ -0.46
RPA1-206ENST00000573994 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
RPA1-206ENST00000573994 ANTXR1Q9H6X2 564 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
RPA1-206ENST00000573994 CYP7A1P22680 504 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 DYNLL1P63167 89 aaKnown RBP12.18□□□□□ -0.46
RPA1-206ENST00000573994 CAP1Q01518 475 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 MAPKAPK5Q8IW41 473 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 CLASRPQ8N2M8 674 aaKnown RBP12.18□□□□□ -0.46
RPA1-206ENST00000573994 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 PICK1Q9NRD5 415 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 TRIM17Q9Y577 477 aa12.18□□□□□ -0.46
RPA1-206ENST00000573994 FLT1P17948 1338 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 COL2A1P02458 1487 aaPredicted RBP12.17□□□□□ -0.46
RPA1-206ENST00000573994 BAG3O95817 575 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
RPA1-206ENST00000573994 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 OTOP1Q7RTM1 612 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 MAGEB6Q8N7X4 407 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 TGFBRAP1Q8WUH2 860 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 ERO1AQ96HE7 468 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 DNAJC2Q99543 621 aaKnown RBP12.17□□□□□ -0.46
RPA1-206ENST00000573994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPA1-206ENST00000573994 SAP30BPQ9UHR5 308 aaKnown RBP12.17□□□□□ -0.46
RPA1-206ENST00000573994 KCNH4Q9UQ05 1017 aa12.17□□□□□ -0.46
RPA1-206ENST00000573994 PTPRAP18433 802 aa12.16□□□□□ -0.46
RPA1-206ENST00000573994 SP3Q02447 781 aa12.16□□□□□ -0.46
RPA1-206ENST00000573994 MOGSQ13724 837 aa12.16□□□□□ -0.46
RPA1-206ENST00000573994 PKN2Q16513 984 aaKnown RBP12.16□□□□□ -0.46
RPA1-206ENST00000573994 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
RPA1-206ENST00000573994 EDC3Q96F86 508 aaKnown RBP12.16□□□□□ -0.46
RPA1-206ENST00000573994 ZHX2Q9Y6X8 837 aa12.16□□□□□ -0.46
RPA1-206ENST00000573994 TRIM75PA6NK02 468 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 PDHXO00330 501 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 GOLIM4O00461 696 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 SMARCA5O60264 1052 aaPredicted RBP12.15□□□□□ -0.46
RPA1-206ENST00000573994 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
RPA1-206ENST00000573994 PPP4CP60510 307 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms