RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PRDM1O75626 825 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 CAPN2P17655 700 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 ADRA2BP18089 450 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 SLC27A3Q5K4L6 730 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 CHMP4CQ96CF2 233 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 USP28Q96RU2 1077 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 KRT23Q9C075 422 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 CNNM2Q9H8M5 875 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 CCDC69A6NI79 296 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 STAG1Q8WVM7 1258 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 ZNF622Q969S3 477 aaKnown RBP eCLIP18.53■□□□□ 0.56
USP43-204ENST00000573955 DACT1Q9NYF0 836 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 OGFRQ9NZT2 677 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 SLC12A7Q9Y666 1083 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 CHD4Q14839 1912 aa18.52■□□□□ 0.56
USP43-204ENST00000573955 CFAP45Q9UL16 551 aa18.52■□□□□ 0.56
USP43-204ENST00000573955 EZH2Q15910 746 aaKnown RBP18.52■□□□□ 0.55
USP43-204ENST00000573955 CCDC82Q8N4S0 544 aa18.52■□□□□ 0.55
USP43-204ENST00000573955 PDGFDQ9GZP0 370 aaPredicted RBP18.52■□□□□ 0.55
USP43-204ENST00000573955 CALCOCO1Q9P1Z2 691 aa18.52■□□□□ 0.55
USP43-204ENST00000573955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
USP43-204ENST00000573955 ST5P78524 1137 aa18.51■□□□□ 0.55
USP43-204ENST00000573955 BAZ2AQ9UIF9 1905 aaKnown RBP18.51■□□□□ 0.55
USP43-204ENST00000573955 SEMA3EO15041 775 aa18.51■□□□□ 0.55
USP43-204ENST00000573955 OLFM4Q6UX06 510 aa18.51■□□□□ 0.55
USP43-204ENST00000573955 CMTR1Q8N1G2 835 aaKnown RBP18.51■□□□□ 0.55
USP43-204ENST00000573955 WTAPQ15007 396 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
USP43-204ENST00000573955 CKAP2LQ8IYA6 745 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 MYH13Q9UKX3 1938 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 NR1I2O75469 434 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 GPSM2P81274 684 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 FBXO18Q8NFZ0 1043 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 NUP133Q8WUM0 1156 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 ALG1Q9BT22 464 aa18.5■□□□□ 0.55
USP43-204ENST00000573955 ERICH2A1L162 156 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 SLFN14P0C7P3 912 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 FAM193AP78312 1265 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 DEFB132Q7Z7B7 95 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 SGMS1Q86VZ5 419 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 NUP62CLQ9H1M0 184 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 FAM217BQ9NTX9 383 aaPredicted RBP18.49■□□□□ 0.55
USP43-204ENST00000573955 KIF28PB7ZC32 967 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 USP17L12C9JPN9 530 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 USP17L21D6R901 530 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 RANBP6O60518 1105 aaKnown RBP18.49■□□□□ 0.55
USP43-204ENST00000573955 SART3Q15020 963 aaKnown RBP18.49■□□□□ 0.55
USP43-204ENST00000573955 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 SLC26A6Q9BXS9 759 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 RNF41Q9H4P4 317 aaPredicted RBP18.49■□□□□ 0.55
USP43-204ENST00000573955 XDHP47989 1333 aa18.49■□□□□ 0.55
USP43-204ENST00000573955 UFL1O94874 794 aa18.48■□□□□ 0.55
USP43-204ENST00000573955 LIFRP42702 1097 aa18.48■□□□□ 0.55
USP43-204ENST00000573955 GRIK5Q16478 980 aa18.48■□□□□ 0.55
USP43-204ENST00000573955 SYNE3Q6ZMZ3 975 aa18.48■□□□□ 0.55
USP43-204ENST00000573955 IRS2Q9Y4H2 1338 aa18.48■□□□□ 0.55
USP43-204ENST00000573955 CTR9Q6PD62 1173 aa18.48■□□□□ 0.55
USP43-204ENST00000573955 CPLX2Q6PUV4 134 aaKnown RBP18.48■□□□□ 0.55
USP43-204ENST00000573955 ZNF396Q96N95 335 aaPredicted RBP18.48■□□□□ 0.55
USP43-204ENST00000573955 TIAM2Q8IVF5 1701 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 CYP2D6P10635 497 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
USP43-204ENST00000573955 ME1P48163 572 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 DIXDC1Q155Q3 683 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 EFCC1Q9HA90 598 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 CDKL5O76039 1030 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 TNMDQ9H2S6 317 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 CLIC4Q9Y696 253 aa18.47■□□□□ 0.55
USP43-204ENST00000573955 POLRMTO00411 1230 aaKnown RBP18.46■□□□□ 0.55
USP43-204ENST00000573955 NTRK3Q16288 839 aa18.46■□□□□ 0.55
USP43-204ENST00000573955 ESR2Q92731 530 aa18.46■□□□□ 0.55
USP43-204ENST00000573955 AKT1S1Q96B36 256 aa18.46■□□□□ 0.55
USP43-204ENST00000573955 LEMD3Q9Y2U8 911 aa18.46■□□□□ 0.55
USP43-204ENST00000573955 TNKSO95271 1327 aa18.46■□□□□ 0.55
USP43-204ENST00000573955 PTMAP06454 111 aaKnown RBP18.46■□□□□ 0.55
USP43-204ENST00000573955 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
USP43-204ENST00000573955 CRNKL1Q9BZJ0 848 aaKnown RBP18.46■□□□□ 0.55
USP43-204ENST00000573955 MYH15Q9Y2K3 1946 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 LDHBP07195 334 aaKnown RBP18.45■□□□□ 0.54
USP43-204ENST00000573955 MAP3K11Q16584 847 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 RBM17Q96I25 401 aaKnown RBP18.45■□□□□ 0.54
USP43-204ENST00000573955 DCP1AQ9NPI6 582 aaPredicted RBP18.45■□□□□ 0.54
USP43-204ENST00000573955 RCOR1Q9UKL0 485 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 GUCY1A2P33402 732 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 KIF23Q02241 960 aaPredicted RBP18.45■□□□□ 0.54
USP43-204ENST00000573955 RTN1Q16799 776 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 KRT40Q6A162 431 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 ZNF804AQ7Z570 1209 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 CCAR1Q8IX12 1150 aaKnown RBP18.45■□□□□ 0.54
USP43-204ENST00000573955 FUCA2Q9BTY2 467 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 GOLPH3LQ9H4A5 285 aa18.45■□□□□ 0.54
USP43-204ENST00000573955 PLSCR1O15162 318 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 MMP10P09238 476 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 TNNT3P45378 269 aaPredicted RBP18.44■□□□□ 0.54
USP43-204ENST00000573955 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 GNL2Q13823 731 aaKnown RBP18.44■□□□□ 0.54
USP43-204ENST00000573955 ZNF654Q8IZM8 581 aa18.44■□□□□ 0.54
USP43-204ENST00000573955 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
USP43-204ENST00000573955 SSRP1Q08945 709 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms