RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 TTC6Q86TZ1 520 aa15.07■□□□□ 0
PRPF8-207ENST00000573681 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
PRPF8-207ENST00000573681 NKX2-3Q8TAU0 364 aa15.07■□□□□ 0
PRPF8-207ENST00000573681 MXD3Q9BW11 206 aa15.07■□□□□ 0
PRPF8-207ENST00000573681 MKNK2Q9HBH9 465 aa15.07■□□□□ 0
PRPF8-207ENST00000573681 SERPINA10Q9UK55 444 aa15.07■□□□□ 0
PRPF8-207ENST00000573681 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
PRPF8-207ENST00000573681 TIAM2Q8IVF5 1701 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 MYH13Q9UKX3 1938 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 JAK2O60674 1132 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
PRPF8-207ENST00000573681 CALM1P0DP23 149 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 CALM2P0DP24 149 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 CALM3P0DP25 149 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 APOBEC3HQ6NTF7 200 aaKnown RBP15.06■□□□□ 0
PRPF8-207ENST00000573681 CDC42EP5Q6NZY7 148 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 ANKS1AQ92625 1134 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 DDX11Q96FC9 970 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 NCOA5Q9HCD5 579 aaKnown RBP15.06■□□□□ 0
PRPF8-207ENST00000573681 TCP11L1Q9NUJ3 509 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 CCDC88AQ3V6T2 1871 aa15.06■□□□□ 0
PRPF8-207ENST00000573681 VPS37CA5D8V6 355 aaPredicted RBP15.05■□□□□ -0
PRPF8-207ENST00000573681 GOLGA8AA7E2F4 631 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 H3BQV1 296 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 TRAK2O60296 914 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 VIL1P09327 827 aaKnown RBP15.05■□□□□ -0
PRPF8-207ENST00000573681 MMP14P50281 582 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 SCNN1DP51172 638 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 IFFO2Q5TF58 517 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 FOXD4L5Q5VV16 416 aaPredicted RBP15.05■□□□□ -0
PRPF8-207ENST00000573681 MCTP1Q6DN14 999 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 DGKHQ86XP1 1220 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 KIAA0825Q8IV33 1275 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 FOXD4L4Q8WXT5 416 aaPredicted RBP15.05■□□□□ -0
PRPF8-207ENST00000573681 ZKSCAN3Q9BRR0 538 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ -0
PRPF8-207ENST00000573681 ZNRF3Q9ULT6 936 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 FLT1P17948 1338 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 ROBO3Q96MS0 1386 aa15.05■□□□□ -0
PRPF8-207ENST00000573681 KIAA1551Q9HCM1 1747 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 TNKSO95271 1327 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 TSPY2A6NKD2 308 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 YDJCA8MPS7 323 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 SMIM22K7EJ46 135 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 PRDM1O75626 825 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 IARSP41252 1262 aaKnown RBP15.04■□□□□ -0
PRPF8-207ENST00000573681 PLCD1P51178 756 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 TFAP4Q01664 338 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 CSPP1Q1MSJ5 1256 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 IFIT1BQ5T764 474 aaKnown RBP15.04■□□□□ -0
PRPF8-207ENST00000573681 RSBN1LQ6PCB5 846 aaPredicted RBP15.04■□□□□ -0
PRPF8-207ENST00000573681 C16orf86Q6ZW13 317 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 CATIPQ7Z7H3 387 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 NIM1KQ8IY84 436 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 ZNF654Q8IZM8 581 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 FANCBQ8NB91 859 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 ZSCAN16Q9H4T2 348 aaPredicted RBP15.04■□□□□ -0
PRPF8-207ENST00000573681 SENP2Q9HC62 589 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 ZNF277Q9NRM2 450 aaPredicted RBP15.04■□□□□ -0
PRPF8-207ENST00000573681 ORC3Q9UBD5 711 aaPredicted RBP15.04■□□□□ -0
PRPF8-207ENST00000573681 PPP1R1BQ9UD71 204 aaPredicted RBP15.04■□□□□ -0
PRPF8-207ENST00000573681 HDAC9Q9UKV0 1011 aa15.04■□□□□ -0
PRPF8-207ENST00000573681 LAMA4Q16363 1823 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 NID2Q14112 1375 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
PRPF8-207ENST00000573681 FDPSP14324 419 aaKnown RBP15.03■□□□□ -0
PRPF8-207ENST00000573681 ADD1P35611 737 aaKnown RBP15.03■□□□□ -0
PRPF8-207ENST00000573681 PTGER2P43116 358 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 CDK8P49336 464 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 RBM5P52756 815 aaKnown RBP eCLIP15.03■□□□□ -0
PRPF8-207ENST00000573681 RTN1Q16799 776 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 ENAHQ8N8S7 591 aaPredicted RBP15.03■□□□□ -0
PRPF8-207ENST00000573681 WASF1Q92558 559 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 DYNLL2Q96FJ2 89 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 IDI2Q9BXS1 227 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 TAOK3Q9H2K8 898 aa15.03■□□□□ -0
PRPF8-207ENST00000573681 PSDA5PKW4 1024 aaPredicted RBP15.02■□□□□ -0
PRPF8-207ENST00000573681 DDAH1O94760 285 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 IFNAR1P17181 557 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 SSRP1Q08945 709 aaKnown RBP15.02■□□□□ -0
PRPF8-207ENST00000573681 FAM47AQ5JRC9 791 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 MICU3Q86XE3 530 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 AGBL3Q8NEM8 1001 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 JDP2Q8WYK2 163 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 DHX36Q9H2U1 1008 aaKnown RBP15.02■□□□□ -0
PRPF8-207ENST00000573681 FAM217BQ9NTX9 383 aaPredicted RBP15.02■□□□□ -0
PRPF8-207ENST00000573681 LMBRD1Q9NUN5 540 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 RBM28Q9NW13 759 aaKnown RBP15.02■□□□□ -0
PRPF8-207ENST00000573681 SWAP70Q9UH65 585 aa15.02■□□□□ -0
PRPF8-207ENST00000573681 PRPF40AO75400 957 aaKnown RBP15.01□□□□□ -0.01
PRPF8-207ENST00000573681 HLA-DOAP06340 250 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 TSPY3P0CV98 308 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 TSPY8P0CW00 308 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 NCLP19338 710 aaKnown RBP15.01□□□□□ -0.01
PRPF8-207ENST00000573681 RASA1P20936 1047 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 CDC27P30260 824 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 NTRK3Q16288 839 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 OGFOD1Q8N543 542 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 NEDD1Q8NHV4 660 aa15.01□□□□□ -0.01
PRPF8-207ENST00000573681 GMLQ99445 158 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms