RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HMMRO75330 724 aa21.15■□□□□ 0.98
SMG6-212ENST00000573153 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMG6-212ENST00000573153 ARHGAP39Q9C0H5 1083 aa21.15■□□□□ 0.98
SMG6-212ENST00000573153 PTPN22Q9Y2R2 807 aa21.15■□□□□ 0.98
SMG6-212ENST00000573153 ZHX2Q9Y6X8 837 aa21.15■□□□□ 0.98
SMG6-212ENST00000573153 SHROOM1Q2M3G4 852 aaPredicted RBP21.14■□□□□ 0.97
SMG6-212ENST00000573153 MAPKAPK5Q8IW41 473 aa21.14■□□□□ 0.97
SMG6-212ENST00000573153 TGFBRAP1Q8WUH2 860 aa21.14■□□□□ 0.97
SMG6-212ENST00000573153 RIOK1Q9BRS2 568 aaKnown RBP21.14■□□□□ 0.97
SMG6-212ENST00000573153 BRCA2P51587 3418 aa21.13■□□□□ 0.97
SMG6-212ENST00000573153 PDHXO00330 501 aa21.13■□□□□ 0.97
SMG6-212ENST00000573153 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
SMG6-212ENST00000573153 IDH1O75874 414 aaKnown RBP21.13■□□□□ 0.97
SMG6-212ENST00000573153 CYP7A1P22680 504 aa21.13■□□□□ 0.97
SMG6-212ENST00000573153 MAGEB6Q8N7X4 407 aa21.13■□□□□ 0.97
SMG6-212ENST00000573153 TCRBV5S4A2TA0A5A2 114 aa21.12■□□□□ 0.97
SMG6-212ENST00000573153 APBB1O00213 710 aa21.12■□□□□ 0.97
SMG6-212ENST00000573153 BAG3O95817 575 aa21.12■□□□□ 0.97
SMG6-212ENST00000573153 CAP2P40123 477 aa21.12■□□□□ 0.97
SMG6-212ENST00000573153 CLASRPQ8N2M8 674 aaKnown RBP21.12■□□□□ 0.97
SMG6-212ENST00000573153 EDC3Q96F86 508 aaKnown RBP21.12■□□□□ 0.97
SMG6-212ENST00000573153 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMG6-212ENST00000573153 RBBP6Q7Z6E9 1792 aaKnown RBP21.12■□□□□ 0.97
SMG6-212ENST00000573153 BCRP11274 1271 aa21.11■□□□□ 0.97
SMG6-212ENST00000573153 PLCG2P16885 1265 aa21.11■□□□□ 0.97
SMG6-212ENST00000573153 LACTBP83111 547 aaPredicted RBP21.11■□□□□ 0.97
SMG6-212ENST00000573153 MIGA1Q8NAN2 632 aa21.11■□□□□ 0.97
SMG6-212ENST00000573153 EFCC1Q9HA90 598 aa21.11■□□□□ 0.97
SMG6-212ENST00000573153 HERC5Q9UII4 1024 aaKnown RBP21.11■□□□□ 0.97
SMG6-212ENST00000573153 PALD1Q9ULE6 856 aa21.11■□□□□ 0.97
SMG6-212ENST00000573153 ARMC5Q96C12 935 aa21.1■□□□□ 0.97
SMG6-212ENST00000573153 DHX36Q9H2U1 1008 aaKnown RBP21.1■□□□□ 0.97
SMG6-212ENST00000573153 PICK1Q9NRD5 415 aa21.1■□□□□ 0.97
SMG6-212ENST00000573153 PI4KBQ9UBF8 816 aa21.1■□□□□ 0.97
SMG6-212ENST00000573153 CPA4Q9UI42 421 aa21.1■□□□□ 0.97
SMG6-212ENST00000573153 MYH1P12882 1939 aa21.1■□□□□ 0.97
SMG6-212ENST00000573153 CYP2C8P10632 490 aa21.09■□□□□ 0.97
SMG6-212ENST00000573153 PDE6AP16499 860 aa21.09■□□□□ 0.97
SMG6-212ENST00000573153 TMED8Q6PL24 325 aaPredicted RBP21.09■□□□□ 0.97
SMG6-212ENST00000573153 CHGBP05060 677 aa21.08■□□□□ 0.97
SMG6-212ENST00000573153 MLLT1Q03111 559 aaPredicted RBP21.08■□□□□ 0.97
SMG6-212ENST00000573153 EVX2Q03828 476 aa21.08■□□□□ 0.97
SMG6-212ENST00000573153 SLFNL1Q499Z3 407 aa21.08■□□□□ 0.97
SMG6-212ENST00000573153 SLC45A1Q9Y2W3 748 aa21.08■□□□□ 0.97
SMG6-212ENST00000573153 NAV1Q8NEY1 1877 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 TRIM75PA6NK02 468 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 SMARCA5O60264 1052 aaPredicted RBP21.07■□□□□ 0.96
SMG6-212ENST00000573153 ATP5JP18859 108 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 MAP3K12Q12852 859 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 TREML2Q5T2D2 321 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 NOL10Q9BSC4 688 aaKnown RBP21.07■□□□□ 0.96
SMG6-212ENST00000573153 DCTPP1Q9H773 170 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 SAP30BPQ9UHR5 308 aaKnown RBP21.07■□□□□ 0.96
SMG6-212ENST00000573153 PCDHB15Q9Y5E8 787 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 PTCH2Q9Y6C5 1203 aa21.07■□□□□ 0.96
SMG6-212ENST00000573153 GOLIM4O00461 696 aa21.06■□□□□ 0.96
SMG6-212ENST00000573153 IFIT2P09913 472 aaKnown RBP21.06■□□□□ 0.96
SMG6-212ENST00000573153 SH3D19Q5HYK7 790 aa21.06■□□□□ 0.96
SMG6-212ENST00000573153 FOXP4Q8IVH2 680 aaPredicted RBP21.06■□□□□ 0.96
SMG6-212ENST00000573153 TRIM47Q96LD4 638 aa21.06■□□□□ 0.96
SMG6-212ENST00000573153 RRP1P56182 461 aaKnown RBP21.05■□□□□ 0.96
SMG6-212ENST00000573153 SPP2Q13103 211 aa21.05■□□□□ 0.96
SMG6-212ENST00000573153 FASTKD5Q7L8L6 764 aaKnown RBP21.05■□□□□ 0.96
SMG6-212ENST00000573153 ZNF280CQ8ND82 737 aa21.05■□□□□ 0.96
SMG6-212ENST00000573153 PARK7Q99497 189 aaKnown RBP21.05■□□□□ 0.96
SMG6-212ENST00000573153 HAUS7Q99871 368 aa21.05■□□□□ 0.96
SMG6-212ENST00000573153 BOLA2Q9H3K6 86 aa21.05■□□□□ 0.96
SMG6-212ENST00000573153 AGTPBP1Q9UPW5 1226 aa21.05■□□□□ 0.96
SMG6-212ENST00000573153 MKI67P46013 3256 aaKnown RBP21.05■□□□□ 0.96
SMG6-212ENST00000573153 MGAMO43451 1857 aa21.05■□□□□ 0.96
SMG6-212ENST00000573153 ZNF532Q9HCE3 1301 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 POTEFA5A3E0 1075 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 TTF1Q15361 905 aaPredicted RBP21.04■□□□□ 0.96
SMG6-212ENST00000573153 SLC4A8Q2Y0W8 1093 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 TATDN1Q6P1N9 297 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 GADL1Q6ZQY3 521 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 CERS3Q8IU89 383 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 ZNF333Q96JL9 665 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 DNAJC2Q99543 621 aaKnown RBP21.04■□□□□ 0.96
SMG6-212ENST00000573153 WDR18Q9BV38 432 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 LRRCC1Q9C099 1032 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 EHD4Q9H223 541 aa21.04■□□□□ 0.96
SMG6-212ENST00000573153 USP17L5A8MUK1 530 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 GDF11O95390 407 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 ADD2P35612 726 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 GABPAQ06546 454 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 SLC9C2Q5TAH2 1124 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 LCORLQ8N3X6 602 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 PROCA1Q8NCQ7 364 aaPredicted RBP21.03■□□□□ 0.96
SMG6-212ENST00000573153 PAG1Q9NWQ8 432 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 ZBTB21Q9ULJ3 1066 aa21.03■□□□□ 0.96
SMG6-212ENST00000573153 MYH7P12883 1935 aa21.02■□□□□ 0.96
SMG6-212ENST00000573153 OSBPP22059 807 aa21.02■□□□□ 0.96
SMG6-212ENST00000573153 PLCD1P51178 756 aa21.02■□□□□ 0.96
SMG6-212ENST00000573153 TBC1D2Q9BYX2 928 aa21.02■□□□□ 0.96
SMG6-212ENST00000573153 SHMT1P34896 483 aa21.01■□□□□ 0.95
SMG6-212ENST00000573153 HMGCS2P54868 508 aa21.01■□□□□ 0.95
SMG6-212ENST00000573153 POTEEQ6S8J3 1075 aa21.01■□□□□ 0.95
SMG6-212ENST00000573153 MAGEB6P1A0A0J9YX57 407 aa21■□□□□ 0.95
SMG6-212ENST00000573153 SMIM22K7EJ46 135 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms