RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 KIF1BPQ96EK5 621 aa25.36■■□□□ 1.65
CHRNB1-204ENST00000572857 PI4KBQ9UBF8 816 aa25.36■■□□□ 1.65
CHRNB1-204ENST00000572857 IGSF3O75054 1194 aa25.35■■□□□ 1.65
CHRNB1-204ENST00000572857 CYP2C8P10632 490 aa25.35■■□□□ 1.65
CHRNB1-204ENST00000572857 MAGEB6Q8N7X4 407 aa25.35■■□□□ 1.65
CHRNB1-204ENST00000572857 MIGA1Q8NAN2 632 aa25.35■■□□□ 1.65
CHRNB1-204ENST00000572857 PARK7Q99497 189 aaKnown RBP25.35■■□□□ 1.65
CHRNB1-204ENST00000572857 DHX36Q9H2U1 1008 aaKnown RBP25.35■■□□□ 1.65
CHRNB1-204ENST00000572857 DOCK2Q92608 1830 aa25.35■■□□□ 1.65
CHRNB1-204ENST00000572857 MAP3K12Q12852 859 aa25.34■■□□□ 1.65
CHRNB1-204ENST00000572857 SAP30BPQ9UHR5 308 aaKnown RBP25.34■■□□□ 1.65
CHRNB1-204ENST00000572857 PALD1Q9ULE6 856 aa25.34■■□□□ 1.65
CHRNB1-204ENST00000572857 PTCH2Q9Y6C5 1203 aa25.34■■□□□ 1.65
CHRNB1-204ENST00000572857 FLT1P17948 1338 aa25.34■■□□□ 1.65
CHRNB1-204ENST00000572857 COL2A1P02458 1487 aaPredicted RBP25.34■■□□□ 1.65
CHRNB1-204ENST00000572857 IFIT2P09913 472 aaKnown RBP25.33■■□□□ 1.65
CHRNB1-204ENST00000572857 PDE3AQ14432 1141 aa25.33■■□□□ 1.65
CHRNB1-204ENST00000572857 RRP1BQ14684 758 aaKnown RBP25.33■■□□□ 1.65
CHRNB1-204ENST00000572857 HERC5Q9UII4 1024 aaKnown RBP25.33■■□□□ 1.65
CHRNB1-204ENST00000572857 RAB11FIP3O75154 756 aa25.32■■□□□ 1.64
CHRNB1-204ENST00000572857 CAP2P40123 477 aa25.32■■□□□ 1.64
CHRNB1-204ENST00000572857 SLC4A8Q2Y0W8 1093 aa25.32■■□□□ 1.64
CHRNB1-204ENST00000572857 TRIM34Q9BYJ4 488 aa25.32■■□□□ 1.64
CHRNB1-204ENST00000572857 PSMC4P43686 418 aa25.31■■□□□ 1.64
CHRNB1-204ENST00000572857 SPP2Q13103 211 aa25.31■■□□□ 1.64
CHRNB1-204ENST00000572857 CRACR2BQ8N4Y2 399 aaPredicted RBP25.31■■□□□ 1.64
CHRNB1-204ENST00000572857 ARMC5Q96C12 935 aa25.31■■□□□ 1.64
CHRNB1-204ENST00000572857 ADGRA2Q96PE1 1338 aa25.31■■□□□ 1.64
CHRNB1-204ENST00000572857 FMNL1O95466 1100 aaPredicted RBP25.3■■□□□ 1.64
CHRNB1-204ENST00000572857 SLC9C1Q4G0N8 1177 aa25.3■■□□□ 1.64
CHRNB1-204ENST00000572857 FOXP4Q8IVH2 680 aaPredicted RBP25.3■■□□□ 1.64
CHRNB1-204ENST00000572857 POTEFA5A3E0 1075 aa25.29■■□□□ 1.64
CHRNB1-204ENST00000572857 CTGFP29279 349 aa25.29■■□□□ 1.64
CHRNB1-204ENST00000572857 USP5P45974 858 aa25.29■■□□□ 1.64
CHRNB1-204ENST00000572857 ZNF280CQ8ND82 737 aa25.29■■□□□ 1.64
CHRNB1-204ENST00000572857 TRIM47Q96LD4 638 aa25.29■■□□□ 1.64
CHRNB1-204ENST00000572857 DNAJC2Q99543 621 aaKnown RBP25.29■■□□□ 1.64
CHRNB1-204ENST00000572857 USP17L5A8MUK1 530 aa25.28■■□□□ 1.64
CHRNB1-204ENST00000572857 MYCP01106 439 aaPredicted RBP25.28■■□□□ 1.64
CHRNB1-204ENST00000572857 GNRH1P01148 92 aa25.28■■□□□ 1.64
CHRNB1-204ENST00000572857 HLA-DOAP06340 250 aa25.28■■□□□ 1.64
CHRNB1-204ENST00000572857 TTF1Q15361 905 aaPredicted RBP25.28■■□□□ 1.64
CHRNB1-204ENST00000572857 NBPF11Q86T75 865 aa25.28■■□□□ 1.64
CHRNB1-204ENST00000572857 GOLIM4O00461 696 aa25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 BCRP11274 1271 aa25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 TREML2Q5T2D2 321 aa25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 CERS3Q8IU89 383 aa25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 SMCR8Q8TEV9 937 aaPredicted RBP25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 DNAJC18Q9H819 358 aa25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 AGTPBP1Q9UPW5 1226 aa25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 SLC45A1Q9Y2W3 748 aa25.27■■□□□ 1.64
CHRNB1-204ENST00000572857 MAST2Q6P0Q8 1798 aa25.26■■□□□ 1.63
CHRNB1-204ENST00000572857 HOXD10P28358 340 aa25.26■■□□□ 1.63
CHRNB1-204ENST00000572857 HMGCS2P54868 508 aa25.26■■□□□ 1.63
CHRNB1-204ENST00000572857 SLC9C2Q5TAH2 1124 aa25.26■■□□□ 1.63
CHRNB1-204ENST00000572857 SH3TC2Q8TF17 1288 aa25.26■■□□□ 1.63
CHRNB1-204ENST00000572857 ZNF333Q96JL9 665 aa25.26■■□□□ 1.63
CHRNB1-204ENST00000572857 HTTP42858 3142 aa25.26■■□□□ 1.63
CHRNB1-204ENST00000572857 OSBPP22059 807 aa25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 PRMT2P55345 433 aa25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 JAG1P78504 1218 aa25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 METTL16Q86W50 562 aaKnown RBP25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 EDC3Q96F86 508 aaKnown RBP25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 TMEM106CQ9BVX2 250 aa25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 TBC1D2Q9BYX2 928 aa25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 AS3MTQ9HBK9 375 aa25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 SRRDQ9UH36 339 aa25.25■■□□□ 1.63
CHRNB1-204ENST00000572857 DOCK1Q14185 1865 aa25.24■■□□□ 1.63
CHRNB1-204ENST00000572857 GDF11O95390 407 aa25.24■■□□□ 1.63
CHRNB1-204ENST00000572857 ASNSP08243 561 aa25.24■■□□□ 1.63
CHRNB1-204ENST00000572857 PDE6AP16499 860 aa25.24■■□□□ 1.63
CHRNB1-204ENST00000572857 SHROOM1Q2M3G4 852 aaPredicted RBP25.24■■□□□ 1.63
CHRNB1-204ENST00000572857 TMED8Q6PL24 325 aaPredicted RBP25.24■■□□□ 1.63
CHRNB1-204ENST00000572857 BOLA2Q9H3K6 86 aa25.24■■□□□ 1.63
CHRNB1-204ENST00000572857 MYO5AQ9Y4I1 1855 aaKnown RBP25.23■■□□□ 1.63
CHRNB1-204ENST00000572857 MAGEB6P1A0A0J9YX57 407 aa25.23■■□□□ 1.63
CHRNB1-204ENST00000572857 FCGRTP55899 365 aa25.23■■□□□ 1.63
CHRNB1-204ENST00000572857 PROCA1Q8NCQ7 364 aaPredicted RBP25.23■■□□□ 1.63
CHRNB1-204ENST00000572857 RAET1EQ8TD07 263 aa25.23■■□□□ 1.63
CHRNB1-204ENST00000572857 SMARCA5O60264 1052 aaPredicted RBP25.22■■□□□ 1.63
CHRNB1-204ENST00000572857 EN2P19622 333 aaPredicted RBP25.22■■□□□ 1.63
CHRNB1-204ENST00000572857 RIOK1Q9BRS2 568 aaKnown RBP25.22■■□□□ 1.63
CHRNB1-204ENST00000572857 LRRCC1Q9C099 1032 aa25.22■■□□□ 1.63
CHRNB1-204ENST00000572857 PNMA3Q9UL41 463 aa25.22■■□□□ 1.63
CHRNB1-204ENST00000572857 MYPNQ86TC9 1320 aa25.21■■□□□ 1.63
CHRNB1-204ENST00000572857 ZNF532Q9HCE3 1301 aa25.21■■□□□ 1.63
CHRNB1-204ENST00000572857 MTMR2Q13614 643 aa25.21■■□□□ 1.63
CHRNB1-204ENST00000572857 ANKRD13CQ8N6S4 541 aa25.21■■□□□ 1.63
CHRNB1-204ENST00000572857 WDR18Q9BV38 432 aa25.21■■□□□ 1.63
CHRNB1-204ENST00000572857 ZSWIM8A7E2V4 1837 aa25.21■■□□□ 1.63
CHRNB1-204ENST00000572857 ATP5JP18859 108 aa25.2■■□□□ 1.62
CHRNB1-204ENST00000572857 TTC6Q86TZ1 520 aa25.2■■□□□ 1.62
CHRNB1-204ENST00000572857 PAG1Q9NWQ8 432 aa25.2■■□□□ 1.62
CHRNB1-204ENST00000572857 SERPINB13Q9UIV8 391 aa25.2■■□□□ 1.62
CHRNB1-204ENST00000572857 ZBTB21Q9ULJ3 1066 aa25.2■■□□□ 1.62
CHRNB1-204ENST00000572857 TNRC18O15417 2968 aaPredicted RBP25.19■■□□□ 1.62
CHRNB1-204ENST00000572857 BACE1P56817 501 aa25.19■■□□□ 1.62
CHRNB1-204ENST00000572857 PRKCZQ05513 592 aa25.19■■□□□ 1.62
CHRNB1-204ENST00000572857 PABPC4Q13310 644 aaKnown RBP eCLIP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms