RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 IGF2BP3O00425 579 aaKnown RBP eCLIP24.97■■□□□ 1.59
CHMP6-204ENST00000572778 IRF6O14896 467 aa24.97■■□□□ 1.59
CHMP6-204ENST00000572778 CTNND1O60716 968 aaKnown RBP24.97■■□□□ 1.59
CHMP6-204ENST00000572778 GLRX3O76003 335 aaKnown RBP24.97■■□□□ 1.59
CHMP6-204ENST00000572778 ALDH1A1P00352 501 aa24.97■■□□□ 1.59
CHMP6-204ENST00000572778 HLA-DOAP06340 250 aa24.97■■□□□ 1.59
CHMP6-204ENST00000572778 UBE3CQ15386 1083 aa24.97■■□□□ 1.59
CHMP6-204ENST00000572778 LCORLQ8N3X6 602 aa24.97■■□□□ 1.59
CHMP6-204ENST00000572778 CRACR2BQ8N4Y2 399 aaPredicted RBP24.97■■□□□ 1.59
CHMP6-204ENST00000572778 KBTBD3Q8NAB2 608 aa24.97■■□□□ 1.59
CHMP6-204ENST00000572778 ARMT1Q9H993 441 aa24.97■■□□□ 1.59
CHMP6-204ENST00000572778 HERC5Q9UII4 1024 aaKnown RBP24.97■■□□□ 1.59
CHMP6-204ENST00000572778 TESPA1A2RU30 521 aaPredicted RBP24.96■■□□□ 1.59
CHMP6-204ENST00000572778 SNAPC2Q13487 334 aa24.96■■□□□ 1.59
CHMP6-204ENST00000572778 OTUD7BQ6GQQ9 843 aa24.96■■□□□ 1.59
CHMP6-204ENST00000572778 FOXP4Q8IVH2 680 aaPredicted RBP24.96■■□□□ 1.59
CHMP6-204ENST00000572778 TNS4Q8IZW8 715 aa24.96■■□□□ 1.59
CHMP6-204ENST00000572778 PTPN18Q99952 460 aa24.96■■□□□ 1.59
CHMP6-204ENST00000572778 LNPKQ9C0E8 428 aa24.96■■□□□ 1.59
CHMP6-204ENST00000572778 MBD4O95243 580 aa24.95■■□□□ 1.58
CHMP6-204ENST00000572778 BRI3BPQ8WY22 251 aa24.95■■□□□ 1.58
CHMP6-204ENST00000572778 SALL3Q9BXA9 1300 aa24.94■■□□□ 1.58
CHMP6-204ENST00000572778 CETPP11597 493 aa24.94■■□□□ 1.58
CHMP6-204ENST00000572778 ZHX2Q9Y6X8 837 aa24.94■■□□□ 1.58
CHMP6-204ENST00000572778 PTPRAP18433 802 aa24.93■■□□□ 1.58
CHMP6-204ENST00000572778 SDR42E1Q8WUS8 393 aa24.93■■□□□ 1.58
CHMP6-204ENST00000572778 POLR3DP05423 398 aaPredicted RBP24.92■■□□□ 1.58
CHMP6-204ENST00000572778 PDE1AP54750 535 aa24.92■■□□□ 1.58
CHMP6-204ENST00000572778 TTC6Q86TZ1 520 aa24.92■■□□□ 1.58
CHMP6-204ENST00000572778 CHD1LQ86WJ1 897 aa24.92■■□□□ 1.58
CHMP6-204ENST00000572778 PUS7LQ9H0K6 701 aaKnown RBP24.92■■□□□ 1.58
CHMP6-204ENST00000572778 R3HDMLQ9H3Y0 253 aa24.92■■□□□ 1.58
CHMP6-204ENST00000572778 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.92■■□□□ 1.58
CHMP6-204ENST00000572778 STAP2Q9UGK3 403 aa24.92■■□□□ 1.58
CHMP6-204ENST00000572778 RNF113AO15541 343 aaKnown RBP24.91■■□□□ 1.58
CHMP6-204ENST00000572778 PRKAB2O43741 272 aa24.91■■□□□ 1.58
CHMP6-204ENST00000572778 CAP2P40123 477 aa24.91■■□□□ 1.58
CHMP6-204ENST00000572778 RRP1BQ14684 758 aaKnown RBP24.91■■□□□ 1.58
CHMP6-204ENST00000572778 LRRFIP1Q32MZ4 808 aaKnown RBP24.91■■□□□ 1.58
CHMP6-204ENST00000572778 CCDC84Q86UT8 332 aaPredicted RBP24.91■■□□□ 1.58
CHMP6-204ENST00000572778 METTL16Q86W50 562 aaKnown RBP24.91■■□□□ 1.58
CHMP6-204ENST00000572778 DNAJC18Q9H819 358 aa24.91■■□□□ 1.58
CHMP6-204ENST00000572778 MCM9Q9NXL9 1143 aa24.91■■□□□ 1.58
CHMP6-204ENST00000572778 KCNH4Q9UQ05 1017 aa24.91■■□□□ 1.58
CHMP6-204ENST00000572778 ZFYP08048 801 aaPredicted RBP24.9■■□□□ 1.58
CHMP6-204ENST00000572778 NUCB1Q02818 461 aa24.9■■□□□ 1.58
CHMP6-204ENST00000572778 FAM43AQ8N2R8 423 aa24.9■■□□□ 1.58
CHMP6-204ENST00000572778 FSD1Q9BTV5 496 aa24.9■■□□□ 1.58
CHMP6-204ENST00000572778 CFHR5Q9BXR6 569 aa24.9■■□□□ 1.58
CHMP6-204ENST00000572778 DCP1AQ9NPI6 582 aaPredicted RBP24.9■■□□□ 1.58
CHMP6-204ENST00000572778 GPR25O00155 361 aa24.89■■□□□ 1.58
CHMP6-204ENST00000572778 CXCL11O14625 94 aa24.89■■□□□ 1.58
CHMP6-204ENST00000572778 APPBP2Q92624 585 aa24.89■■□□□ 1.58
CHMP6-204ENST00000572778 SERPINB13Q9UIV8 391 aa24.89■■□□□ 1.58
CHMP6-204ENST00000572778 SLC4A4Q9Y6R1 1079 aa24.89■■□□□ 1.58
CHMP6-204ENST00000572778 BTBD19C9JJ37 291 aa24.88■■□□□ 1.57
CHMP6-204ENST00000572778 PLCD1P51178 756 aa24.88■■□□□ 1.57
CHMP6-204ENST00000572778 CRHR2Q13324 411 aa24.88■■□□□ 1.57
CHMP6-204ENST00000572778 ZNF296Q8WUU4 475 aaPredicted RBP24.88■■□□□ 1.57
CHMP6-204ENST00000572778 OSBP2Q969R2 916 aa24.88■■□□□ 1.57
CHMP6-204ENST00000572778 ATP8A2Q9NTI2 1148 aa24.88■■□□□ 1.57
CHMP6-204ENST00000572778 AFG3L2Q9Y4W6 797 aa24.88■■□□□ 1.57
CHMP6-204ENST00000572778 TRIM75PA6NK02 468 aa24.87■■□□□ 1.57
CHMP6-204ENST00000572778 TAF1CQ15572 869 aaPredicted RBP24.87■■□□□ 1.57
CHMP6-204ENST00000572778 DDRGK1Q96HY6 314 aa24.87■■□□□ 1.57
CHMP6-204ENST00000572778 EHD4Q9H223 541 aa24.87■■□□□ 1.57
CHMP6-204ENST00000572778 GDF11O95390 407 aa24.86■■□□□ 1.57
CHMP6-204ENST00000572778 ZFYVE28Q9HCC9 887 aa24.86■■□□□ 1.57
CHMP6-204ENST00000572778 CDK5RAP2Q96SN8 1893 aa24.85■■□□□ 1.57
CHMP6-204ENST00000572778 FOCADQ5VW36 1801 aa24.85■■□□□ 1.57
CHMP6-204ENST00000572778 USP17L5A8MUK1 530 aa24.85■■□□□ 1.57
CHMP6-204ENST00000572778 EVI5LQ96CN4 794 aa24.85■■□□□ 1.57
CHMP6-204ENST00000572778 STRBPQ96SI9 672 aaKnown RBP24.85■■□□□ 1.57
CHMP6-204ENST00000572778 FKTNO75072 461 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 ASNSP08243 561 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 CYP2D6P10635 497 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 JAG1P78504 1218 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 EVX2Q03828 476 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 SPP2Q13103 211 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 NOM1Q5C9Z4 860 aaKnown RBP24.84■■□□□ 1.57
CHMP6-204ENST00000572778 GADL1Q6ZQY3 521 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 FASTKD5Q7L8L6 764 aaKnown RBP24.84■■□□□ 1.57
CHMP6-204ENST00000572778 ANKRD23Q86SG2 305 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 AMOTL1Q8IY63 956 aa24.84■■□□□ 1.57
CHMP6-204ENST00000572778 A0A0G2JLL6 359 aaPredicted RBP24.83■■□□□ 1.57
CHMP6-204ENST00000572778 M0R2C6 588 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 DGKZQ13574 1117 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 MOGSQ13724 837 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 SHROOM1Q2M3G4 852 aaPredicted RBP24.83■■□□□ 1.57
CHMP6-204ENST00000572778 TATDN1Q6P1N9 297 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 PRRT2Q7Z6L0 340 aaPredicted RBP24.83■■□□□ 1.57
CHMP6-204ENST00000572778 PLEKHM2Q8IWE5 1019 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 ZNF280CQ8ND82 737 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 TBC1D2Q9BYX2 928 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 AS3MTQ9HBK9 375 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 ZCCHC17Q9NP64 241 aaKnown RBP24.83■■□□□ 1.57
CHMP6-204ENST00000572778 SIPA1L1O43166 1804 aa24.83■■□□□ 1.57
CHMP6-204ENST00000572778 USP17L12C9JPN9 530 aa24.82■■□□□ 1.56
CHMP6-204ENST00000572778 USP17L21D6R901 530 aa24.82■■□□□ 1.56
CHMP6-204ENST00000572778 PDHXO00330 501 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms