RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 NT5C2P49902 561 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 SEC23AQ15436 765 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 DACT2Q5SW24 774 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 HHIPL2Q6UWX4 724 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 SYNE3Q6ZMZ3 975 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 MICU3Q86XE3 530 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 ZSCAN10Q96SZ4 725 aaPredicted RBP24.05■■□□□ 1.44
CHRNE-202ENST00000572438 TNKSO95271 1327 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 NID2Q14112 1375 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 FLT1P17948 1338 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 USP17L3A6NCW0 530 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 USP17L4A6NCW7 530 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 PPIP5K2O43314 1243 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 FOXD4L6Q3SYB3 417 aaPredicted RBP24.05■■□□□ 1.44
CHRNE-202ENST00000572438 FOXD4L3Q6VB84 417 aaPredicted RBP24.05■■□□□ 1.44
CHRNE-202ENST00000572438 USP17L1Q7RTZ2 530 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 IQCA1Q86XH1 822 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 PSMD1Q99460 953 aa24.05■■□□□ 1.44
CHRNE-202ENST00000572438 GOLGA8AA7E2F4 631 aa24.04■■□□□ 1.44
CHRNE-202ENST00000572438 H3BQV1 296 aa24.04■■□□□ 1.44
CHRNE-202ENST00000572438 PRPF40AO75400 957 aaKnown RBP24.04■■□□□ 1.44
CHRNE-202ENST00000572438 FDPSP14324 419 aaKnown RBP24.04■■□□□ 1.44
CHRNE-202ENST00000572438 IFFO2Q5TF58 517 aa24.04■■□□□ 1.44
CHRNE-202ENST00000572438 TEKT1Q969V4 418 aa24.04■■□□□ 1.44
CHRNE-202ENST00000572438 NAV1Q8NEY1 1877 aa24.04■■□□□ 1.44
CHRNE-202ENST00000572438 POLR3DP05423 398 aaPredicted RBP24.03■■□□□ 1.44
CHRNE-202ENST00000572438 RXRAP19793 462 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 SCNN1DP51172 638 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 RCAN1P53805 252 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 SLC4A8Q2Y0W8 1093 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 SAP30BPQ9UHR5 308 aaKnown RBP24.03■■□□□ 1.44
CHRNE-202ENST00000572438 CDKL5O76039 1030 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 ADD1P35611 737 aaKnown RBP24.03■■□□□ 1.44
CHRNE-202ENST00000572438 CPLX2Q6PUV4 134 aaKnown RBP24.03■■□□□ 1.44
CHRNE-202ENST00000572438 ENAHQ8N8S7 591 aaPredicted RBP24.03■■□□□ 1.44
CHRNE-202ENST00000572438 MYL10Q9BUA6 226 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 MRIQ9BWK5 157 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 PIM2Q9P1W9 311 aa24.03■■□□□ 1.44
CHRNE-202ENST00000572438 PPFIA3O75145 1194 aa24.02■■□□□ 1.44
CHRNE-202ENST00000572438 CDC27P30260 824 aa24.02■■□□□ 1.44
CHRNE-202ENST00000572438 SOGA3Q5TF21 947 aa24.02■■□□□ 1.44
CHRNE-202ENST00000572438 FERMT3Q86UX7 667 aa24.01■■□□□ 1.43
CHRNE-202ENST00000572438 DYNLL2Q96FJ2 89 aa24.01■■□□□ 1.43
CHRNE-202ENST00000572438 FAM217BQ9NTX9 383 aaPredicted RBP24.01■■□□□ 1.43
CHRNE-202ENST00000572438 ORC3Q9UBD5 711 aaPredicted RBP24.01■■□□□ 1.43
CHRNE-202ENST00000572438 DDX60LQ5H9U9 1706 aaKnown RBP24.01■■□□□ 1.43
CHRNE-202ENST00000572438 PLCD1P51178 756 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 GSE1Q14687 1217 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 CCDC144CPQ8IYA2 1237 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 ZNF654Q8IZM8 581 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 SCN9AQ15858 1988 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 CRKP46108 304 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 HDLBPQ00341 1268 aaKnown RBP24■■□□□ 1.43
CHRNE-202ENST00000572438 KLHL40Q2TBA0 621 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 FAM47AQ5JRC9 791 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 IFIT1BQ5T764 474 aaKnown RBP24■■□□□ 1.43
CHRNE-202ENST00000572438 KIAA0825Q8IV33 1275 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 CNPY2Q9Y2B0 182 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 DDX49Q9Y6V7 483 aaKnown RBP24■■□□□ 1.43
CHRNE-202ENST00000572438 CDK5RAP2Q96SN8 1893 aa24■■□□□ 1.43
CHRNE-202ENST00000572438 TSPY2A6NKD2 308 aa23.99■■□□□ 1.43
CHRNE-202ENST00000572438 APOBEC3HQ6NTF7 200 aaKnown RBP23.99■■□□□ 1.43
CHRNE-202ENST00000572438 TMEM87AQ8NBN3 555 aa23.99■■□□□ 1.43
CHRNE-202ENST00000572438 ZDHHC15Q96MV8 337 aa23.99■■□□□ 1.43
CHRNE-202ENST00000572438 VPS33BQ9H267 617 aa23.99■■□□□ 1.43
CHRNE-202ENST00000572438 MKNK2Q9HBH9 465 aa23.99■■□□□ 1.43
CHRNE-202ENST00000572438 USP40Q9NVE5 1235 aa23.99■■□□□ 1.43
CHRNE-202ENST00000572438 YDJCA8MPS7 323 aa23.98■■□□□ 1.43
CHRNE-202ENST00000572438 NTRK3Q16288 839 aa23.98■■□□□ 1.43
CHRNE-202ENST00000572438 RTN1Q16799 776 aa23.98■■□□□ 1.43
CHRNE-202ENST00000572438 ZNF287Q9HBT7 754 aa23.98■■□□□ 1.43
CHRNE-202ENST00000572438 ZNF646O15015 1829 aaPredicted RBP23.98■■□□□ 1.43
CHRNE-202ENST00000572438 WDHD1O75717 1129 aaPredicted RBP23.98■■□□□ 1.43
CHRNE-202ENST00000572438 DNM1Q05193 864 aaKnown RBP23.98■■□□□ 1.43
CHRNE-202ENST00000572438 RESTQ13127 1097 aa23.98■■□□□ 1.43
CHRNE-202ENST00000572438 CDC42EP5Q6NZY7 148 aa23.98■■□□□ 1.43
CHRNE-202ENST00000572438 ZSCAN16Q9H4T2 348 aaPredicted RBP23.98■■□□□ 1.43
CHRNE-202ENST00000572438 CCDC196A0A1B0GTZ2 297 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 FOSBP53539 338 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 TFAP4Q01664 338 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 DALRD3Q5D0E6 543 aaKnown RBP23.97■■□□□ 1.43
CHRNE-202ENST00000572438 C16orf86Q6ZW13 317 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 CATIPQ7Z7H3 387 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 USP48Q86UV5 1035 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 FANCBQ8NB91 859 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 SGIP1Q9BQI5 828 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 GDPD2Q9HCC8 539 aa23.97■■□□□ 1.43
CHRNE-202ENST00000572438 ZNF277Q9NRM2 450 aaPredicted RBP23.97■■□□□ 1.43
CHRNE-202ENST00000572438 NCLP19338 710 aaKnown RBP23.96■■□□□ 1.43
CHRNE-202ENST00000572438 PPP2R5BQ15173 497 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 LARGE2Q8N3Y3 721 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 RGS22Q8NE09 1264 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 NMT2O60551 498 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 IFNAR1P17181 557 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 IARSP41252 1262 aaKnown RBP23.96■■□□□ 1.43
CHRNE-202ENST00000572438 PICALMQ13492 652 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 SLC44A5Q8NCS7 719 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 C8orf76Q96K31 380 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 GZF1Q9H116 711 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms