RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 SRP68Q9UHB9 627 aaKnown RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 COL4A1P02462 1669 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 CCDC196A0A1B0GTZ2 297 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 BAG6P46379 1132 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 CCDC92Q53HC0 331 aaPredicted RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 FMNL3Q8IVF7 1028 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 STAG1Q8WVM7 1258 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 FAM89AQ96GI7 184 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 POLR3CQ9BUI4 534 aaPredicted RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 PPFIA3O75145 1194 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 GPTP24298 496 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 ZBED6P86452 979 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 TTC22Q5TAA0 569 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 ANKRD13BQ86YJ7 626 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 TTLL11Q8NHH1 800 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 IL17RAQ96F46 866 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 CALCOCO1Q9P1Z2 691 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 SFMBT1Q9UHJ3 866 aa10.32□□□□□ -0.76
TVP23A-205ENST00000572428 U3KPZ7 1027 aaPredicted RBP10.32□□□□□ -0.76
TVP23A-205ENST00000572428 COL11A2P13942 1736 aaPredicted RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 FRAT2O75474 233 aaPredicted RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 CIAO1O76071 339 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 CTSWP56202 376 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 SLC7A5P2Q9GIP4 190 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 BICDL2A1A5D9 508 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 IRS4O14654 1257 aaPredicted RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 TCEAL1Q15170 157 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 SLC15A2Q16348 729 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 COL23A1Q86Y22 540 aaPredicted RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 TBC1D2Q9BYX2 928 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 OSBPL3Q9H4L5 887 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 DMGDHQ9UI17 866 aaKnown RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 SF3B3Q15393 1217 aaKnown RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 LMBR1LQ6UX01 489 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 TBC1D9Q6ZT07 1266 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 SMIM5Q71RC9 77 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 NCAPG2Q86XI2 1143 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 ERC1Q8IUD2 1116 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 TRIM11Q96F44 468 aa10.31□□□□□ -0.76
TVP23A-205ENST00000572428 R3HCC1Q9Y3T6 440 aaKnown RBP10.31□□□□□ -0.76
TVP23A-205ENST00000572428 LTBP1Q14766 1721 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 KIAA1551Q9HCM1 1747 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 SETSIPP0DME0 302 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.3□□□□□ -0.76
TVP23A-205ENST00000572428 SOGA3Q5TF21 947 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 EGFLAMQ63HQ2 1017 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 SLF2Q8IX21 1173 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 SNX21Q969T3 373 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 SETDB2Q96T68 719 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 MPHOSPH6Q99547 160 aaKnown RBP10.3□□□□□ -0.76
TVP23A-205ENST00000572428 MTA2O94776 668 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
TVP23A-205ENST00000572428 CLK1P49759 484 aaKnown RBP10.3□□□□□ -0.76
TVP23A-205ENST00000572428 KIAA2012Q0VF49 1180 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 NFIXQ14938 502 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 CCDC178Q5BJE1 867 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 JARID2Q92833 1246 aaPredicted RBP10.3□□□□□ -0.76
TVP23A-205ENST00000572428 KIF1BPQ96EK5 621 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 LRRCC1Q9C099 1032 aa10.3□□□□□ -0.76
TVP23A-205ENST00000572428 V9GYY5 206 aaPredicted RBP10.3□□□□□ -0.76
TVP23A-205ENST00000572428 RAD50Q92878 1312 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 PTPROQ16827 1216 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 PREPLQ4J6C6 727 aaPredicted RBP10.29□□□□□ -0.76
TVP23A-205ENST00000572428 TBC1D10BQ4KMP7 808 aaPredicted RBP10.29□□□□□ -0.76
TVP23A-205ENST00000572428 SYNE4Q8N205 404 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 TEKT1Q969V4 418 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 IFT122Q9HBG6 1241 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 ABCC12Q96J65 1359 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 AOX1Q06278 1338 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 GSPT1P15170 499 aaKnown RBP10.29□□□□□ -0.76
TVP23A-205ENST00000572428 TRDNQ13061 729 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 NT5DC4Q86YG4 428 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 RHPN1Q8TCX5 695 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 EXOC6BQ9Y2D4 811 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 KLRG2A4D1S0 409 aaPredicted RBP10.29□□□□□ -0.76
TVP23A-205ENST00000572428 POLRMTO00411 1230 aaKnown RBP10.29□□□□□ -0.76
TVP23A-205ENST00000572428 SASH1O94885 1247 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 ALKBH2Q6NS38 261 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 ATG9AQ7Z3C6 839 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 GPR108Q9NPR9 543 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 TFCP2L1Q9NZI6 479 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 STAP2Q9UGK3 403 aa10.29□□□□□ -0.76
TVP23A-205ENST00000572428 SURF6O75683 361 aaKnown RBP10.28□□□□□ -0.76
TVP23A-205ENST00000572428 MMEP08473 750 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 WASHC5Q12768 1159 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 ERFEQ4G0M1 354 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 HSP90B2PQ58FF3 399 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 NAIF1Q69YI7 327 aaPredicted RBP10.28□□□□□ -0.76
TVP23A-205ENST00000572428 TPTE2Q6XPS3 522 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 AKAP11Q9UKA4 1901 aa10.28□□□□□ -0.76
TVP23A-205ENST00000572428 HOXA10P31260 410 aaPredicted RBP10.28□□□□□ -0.76
TVP23A-205ENST00000572428 KCTD2Q14681 263 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms