RNA–Protein interactions for RNA: ENST00000572152.5

ABR-216, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-216ENST00000572152 EFCC1Q9HA90 598 aa12.16□□□□□ -0.46
ABR-216ENST00000572152 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
ABR-216ENST00000572152 PI4KBQ9UBF8 816 aa12.16□□□□□ -0.46
ABR-216ENST00000572152 HERC5Q9UII4 1024 aaKnown RBP12.16□□□□□ -0.46
ABR-216ENST00000572152 A0A0G2JLL6 359 aaPredicted RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 GOLIM4O00461 696 aa12.15□□□□□ -0.46
ABR-216ENST00000572152 SOX10P56693 466 aa12.15□□□□□ -0.46
ABR-216ENST00000572152 MLLT1Q03111 559 aaPredicted RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 RRP1BQ14684 758 aaKnown RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
ABR-216ENST00000572152 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
ABR-216ENST00000572152 FASTKD5Q7L8L6 764 aaKnown RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 PRRT2Q7Z6L0 340 aaPredicted RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 CCDC84Q86UT8 332 aaPredicted RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 LRRCC1Q9C099 1032 aa12.15□□□□□ -0.46
ABR-216ENST00000572152 SAP30BPQ9UHR5 308 aaKnown RBP12.15□□□□□ -0.46
ABR-216ENST00000572152 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
ABR-216ENST00000572152 PTPN22Q9Y2R2 807 aa12.15□□□□□ -0.46
ABR-216ENST00000572152 TRIM75PA6NK02 468 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 SMARCA5O60264 1052 aaPredicted RBP12.14□□□□□ -0.47
ABR-216ENST00000572152 ATP5JP18859 108 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 CAP2P40123 477 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 USP5P45974 858 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 SLC9C2Q5TAH2 1124 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 C17orf99Q6UX52 265 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 GADL1Q6ZQY3 521 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
ABR-216ENST00000572152 FOXP4Q8IVH2 680 aaPredicted RBP12.14□□□□□ -0.47
ABR-216ENST00000572152 CRACR2BQ8N4Y2 399 aaPredicted RBP12.14□□□□□ -0.47
ABR-216ENST00000572152 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
ABR-216ENST00000572152 CPA4Q9UI42 421 aa12.14□□□□□ -0.47
ABR-216ENST00000572152 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
ABR-216ENST00000572152 ADGRA2Q96PE1 1338 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 PDE6AP16499 860 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
ABR-216ENST00000572152 LACTBP83111 547 aaPredicted RBP12.13□□□□□ -0.47
ABR-216ENST00000572152 KIF22Q14807 665 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 YTHDC1Q96MU7 727 aaKnown RBP12.13□□□□□ -0.47
ABR-216ENST00000572152 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
ABR-216ENST00000572152 RIOK1Q9BRS2 568 aaKnown RBP12.13□□□□□ -0.47
ABR-216ENST00000572152 TRIM34Q9BYJ4 488 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 ARHGAP39Q9C0H5 1083 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 DNAJC18Q9H819 358 aa12.13□□□□□ -0.47
ABR-216ENST00000572152 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 MAGEB6P1A0A0J9YX57 407 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 CYP2C8P10632 490 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 SPP2Q13103 211 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 SLC4A8Q2Y0W8 1093 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 ZNF280CQ8ND82 737 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 HAUS7Q99871 368 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 DCTPP1Q9H773 170 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 PAG1Q9NWQ8 432 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 SLC45A1Q9Y2W3 748 aa12.12□□□□□ -0.47
ABR-216ENST00000572152 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 ASNSP08243 561 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 JAG1P78504 1218 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 AGTPBP1Q9UPW5 1226 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
ABR-216ENST00000572152 FOCADQ5VW36 1801 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
ABR-216ENST00000572152 GDF11O95390 407 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 GNRH1P01148 92 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 BCRP11274 1271 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 PSMC4P43686 418 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 HMGCS2P54868 508 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 SHROOM1Q2M3G4 852 aaPredicted RBP12.1□□□□□ -0.47
ABR-216ENST00000572152 TREML2Q5T2D2 321 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 TTC6Q86TZ1 520 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 PROCA1Q8NCQ7 364 aaPredicted RBP12.1□□□□□ -0.47
ABR-216ENST00000572152 ARMC5Q96C12 935 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
ABR-216ENST00000572152 EHD4Q9H223 541 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 ECHDC1Q9NTX5 307 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 SERPINB13Q9UIV8 391 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 PTCH2Q9Y6C5 1203 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 CDK5RAP2Q96SN8 1893 aa12.1□□□□□ -0.47
ABR-216ENST00000572152 PHIPQ8WWQ0 1821 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 CTGFP29279 349 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 ADD2P35612 726 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 SLFNL1Q499Z3 407 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 SH3D19Q5HYK7 790 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.09□□□□□ -0.47
ABR-216ENST00000572152 ZBTB21Q9ULJ3 1066 aa12.09□□□□□ -0.47
ABR-216ENST00000572152 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
ABR-216ENST00000572152 GH2P01242 217 aa12.08□□□□□ -0.48
ABR-216ENST00000572152 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
ABR-216ENST00000572152 HOXD10P28358 340 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms