RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 SGPL1O95470 568 aa16.7■□□□□ 0.26
RPAIN-209ENST00000571558 SLC5A1P13866 664 aa16.7■□□□□ 0.26
RPAIN-209ENST00000571558 CACNB3P54284 484 aa16.7■□□□□ 0.26
RPAIN-209ENST00000571558 GPR153Q6NV75 609 aa16.7■□□□□ 0.26
RPAIN-209ENST00000571558 CXCL11O14625 94 aa16.69■□□□□ 0.26
RPAIN-209ENST00000571558 IFIT1P09914 478 aaKnown RBP16.69■□□□□ 0.26
RPAIN-209ENST00000571558 PXYLP1Q8TE99 480 aa16.69■□□□□ 0.26
RPAIN-209ENST00000571558 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
RPAIN-209ENST00000571558 CUL9Q8IWT3 2517 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 COL6A3P12111 3177 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 EVI5O60447 810 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 BCRP11274 1271 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
RPAIN-209ENST00000571558 KCNA4P22459 653 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 MNX1P50219 401 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-209ENST00000571558 GRIK5Q16478 980 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 NOL9Q5SY16 702 aaKnown RBP16.68■□□□□ 0.26
RPAIN-209ENST00000571558 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 ZSWIM8A7E2V4 1837 aa16.68■□□□□ 0.26
RPAIN-209ENST00000571558 ATP5JP18859 108 aa16.67■□□□□ 0.26
RPAIN-209ENST00000571558 INPP5BP32019 993 aa16.67■□□□□ 0.26
RPAIN-209ENST00000571558 PRKCZQ05513 592 aa16.67■□□□□ 0.26
RPAIN-209ENST00000571558 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
RPAIN-209ENST00000571558 TTC22Q5TAA0 569 aa16.67■□□□□ 0.26
RPAIN-209ENST00000571558 ZNF512BQ96KM6 892 aaPredicted RBP16.67■□□□□ 0.26
RPAIN-209ENST00000571558 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
RPAIN-209ENST00000571558 PHKA1P46020 1223 aa16.66■□□□□ 0.26
RPAIN-209ENST00000571558 IRF5Q13568 498 aa16.66■□□□□ 0.26
RPAIN-209ENST00000571558 MOGSQ13724 837 aa16.66■□□□□ 0.26
RPAIN-209ENST00000571558 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
RPAIN-209ENST00000571558 MIGA2Q7L4E1 593 aa16.66■□□□□ 0.26
RPAIN-209ENST00000571558 FASTKD5Q7L8L6 764 aaKnown RBP16.66■□□□□ 0.26
RPAIN-209ENST00000571558 ZBTB22O15209 634 aa16.65■□□□□ 0.26
RPAIN-209ENST00000571558 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-209ENST00000571558 BCAMP50895 628 aa16.65■□□□□ 0.26
RPAIN-209ENST00000571558 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
RPAIN-209ENST00000571558 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
RPAIN-209ENST00000571558 IQSEC3Q9UPP2 1182 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-209ENST00000571558 SLC45A1Q9Y2W3 748 aa16.65■□□□□ 0.26
RPAIN-209ENST00000571558 LAMA3Q16787 3333 aa16.64■□□□□ 0.25
RPAIN-209ENST00000571558 ERC2O15083 957 aa16.64■□□□□ 0.25
RPAIN-209ENST00000571558 ADCY3O60266 1144 aa16.64■□□□□ 0.25
RPAIN-209ENST00000571558 BMP8BP34820 402 aa16.64■□□□□ 0.25
RPAIN-209ENST00000571558 CCDC158Q5M9N0 1113 aa16.64■□□□□ 0.25
RPAIN-209ENST00000571558 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
RPAIN-209ENST00000571558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
RPAIN-209ENST00000571558 UNC93B1Q9H1C4 597 aa16.64■□□□□ 0.25
RPAIN-209ENST00000571558 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-209ENST00000571558 TFRCP02786 760 aaKnown RBP16.63■□□□□ 0.25
RPAIN-209ENST00000571558 GPAT2Q6NUI2 795 aa16.63■□□□□ 0.25
RPAIN-209ENST00000571558 HAUS7Q99871 368 aa16.63■□□□□ 0.25
RPAIN-209ENST00000571558 PAK6Q9NQU5 681 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-209ENST00000571558 FLT3LGP49771 235 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 TTC39AQ5SRH9 613 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 CRISPLD2Q9H0B8 497 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-209ENST00000571558 INHAP05111 366 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 CYP2C8P10632 490 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 SDSP20132 328 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 MCAMP43121 646 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-209ENST00000571558 ANKLE1Q8NAG6 615 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 GABRQQ9UN88 632 aa16.62■□□□□ 0.25
RPAIN-209ENST00000571558 SOX1O00570 391 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-209ENST00000571558 TNPO2O14787 897 aaKnown RBP16.61■□□□□ 0.25
RPAIN-209ENST00000571558 PI16Q6UXB8 463 aa16.61■□□□□ 0.25
RPAIN-209ENST00000571558 NECAB2Q7Z6G3 386 aa16.61■□□□□ 0.25
RPAIN-209ENST00000571558 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
RPAIN-209ENST00000571558 GDF15Q99988 308 aa16.61■□□□□ 0.25
RPAIN-209ENST00000571558 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
RPAIN-209ENST00000571558 CDC42EP5Q6NZY7 148 aa16.6■□□□□ 0.25
RPAIN-209ENST00000571558 LRCH3Q96II8 777 aa16.6■□□□□ 0.25
RPAIN-209ENST00000571558 PICK1Q9NRD5 415 aa16.6■□□□□ 0.25
RPAIN-209ENST00000571558 NDUFB9Q9Y6M9 179 aa16.6■□□□□ 0.25
RPAIN-209ENST00000571558 ZHX2Q9Y6X8 837 aa16.6■□□□□ 0.25
RPAIN-209ENST00000571558 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
RPAIN-209ENST00000571558 SEMA3EO15041 775 aa16.59■□□□□ 0.25
RPAIN-209ENST00000571558 MAP4K4O95819 1239 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-209ENST00000571558 TCP10Q12799 353 aa16.59■□□□□ 0.25
RPAIN-209ENST00000571558 LRIT3Q3SXY7 679 aa16.59■□□□□ 0.25
RPAIN-209ENST00000571558 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
RPAIN-209ENST00000571558 COA7Q96BR5 231 aa16.59■□□□□ 0.25
RPAIN-209ENST00000571558 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
RPAIN-209ENST00000571558 PAWRQ96IZ0 340 aaKnown RBP16.59■□□□□ 0.25
RPAIN-209ENST00000571558 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
RPAIN-209ENST00000571558 PHF20L1A8MW92 1017 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 ELNP15502 786 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 ZAP70P43403 619 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 MAP3K10Q02779 954 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 SPATA5Q8NB90 893 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 SMCR8Q8TEV9 937 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-209ENST00000571558 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
RPAIN-209ENST00000571558 STXBP5LQ9Y2K9 1186 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 AFG3L2Q9Y4W6 797 aa16.58■□□□□ 0.24
RPAIN-209ENST00000571558 ENTPD3O75355 529 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 CYP2E1P05181 493 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms