RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PTPRCP08575 1304 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 VCANP13611 3396 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
CHMP6-202ENST00000571457 CIAO1O76071 339 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 XRCC5P13010 732 aaKnown RBP14.1□□□□□ -0.15
CHMP6-202ENST00000571457 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
CHMP6-202ENST00000571457 RFX5P48382 616 aaPredicted RBP14.1□□□□□ -0.15
CHMP6-202ENST00000571457 HMGCS2P54868 508 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 TRIM32Q13049 653 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 MAP3K21Q5TCX8 1036 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 SOCS4Q8WXH5 440 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 TRIB2Q92519 343 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 NUDT12Q9BQG2 462 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 USP44Q9H0E7 712 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 ASCC2Q9H1I8 757 aaPredicted RBP14.1□□□□□ -0.15
CHMP6-202ENST00000571457 MORF4L1Q9UBU8 362 aa14.1□□□□□ -0.15
CHMP6-202ENST00000571457 MAP4K4O95819 1239 aaPredicted RBP14.09□□□□□ -0.15
CHMP6-202ENST00000571457 CYP2B6P20813 491 aa14.09□□□□□ -0.15
CHMP6-202ENST00000571457 BTDP43251 543 aa14.09□□□□□ -0.15
CHMP6-202ENST00000571457 PHKA1P46020 1223 aa14.09□□□□□ -0.15
CHMP6-202ENST00000571457 IRX3P78415 501 aaPredicted RBP14.09□□□□□ -0.15
CHMP6-202ENST00000571457 CCDC84Q86UT8 332 aaPredicted RBP14.09□□□□□ -0.15
CHMP6-202ENST00000571457 AS3MTQ9HBK9 375 aa14.09□□□□□ -0.15
CHMP6-202ENST00000571457 DDX4Q9NQI0 724 aaKnown RBP14.09□□□□□ -0.15
CHMP6-202ENST00000571457 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.09□□□□□ -0.15
CHMP6-202ENST00000571457 ABCF2Q9UG63 623 aa14.09□□□□□ -0.15
CHMP6-202ENST00000571457 PFASO15067 1338 aa14.09□□□□□ -0.15
CHMP6-202ENST00000571457 USP17L5A8MUK1 530 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 COL6A1P12109 1028 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 PDE3AQ14432 1141 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 SH3D19Q5HYK7 790 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 LBHD1Q9BQE6 289 aaPredicted RBP14.08□□□□□ -0.16
CHMP6-202ENST00000571457 SIL1Q9H173 461 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 MRS2Q9HD23 443 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 LOC285556D6RIA3 1793 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 MROH7-TTC4A0A0A0MT08 1334 aa14.08□□□□□ -0.16
CHMP6-202ENST00000571457 PDS5AQ29RF7 1337 aaKnown RBP14.08□□□□□ -0.16
CHMP6-202ENST00000571457 GPR75-ASB3A0A0A6YYF3 556 aa14.07□□□□□ -0.16
CHMP6-202ENST00000571457 SLURP2P0DP57 97 aa14.07□□□□□ -0.16
CHMP6-202ENST00000571457 ZKSCAN1P17029 563 aaPredicted RBP14.07□□□□□ -0.16
CHMP6-202ENST00000571457 MAPK4P31152 587 aa14.07□□□□□ -0.16
CHMP6-202ENST00000571457 CAP2P40123 477 aa14.07□□□□□ -0.16
CHMP6-202ENST00000571457 IL15P40933 162 aaPredicted RBP14.07□□□□□ -0.16
CHMP6-202ENST00000571457 MDM2Q00987 491 aaPredicted RBP14.07□□□□□ -0.16
CHMP6-202ENST00000571457 CCDC102BQ68D86 513 aa14.07□□□□□ -0.16
CHMP6-202ENST00000571457 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
CHMP6-202ENST00000571457 MRPL50Q8N5N7 158 aaKnown RBP14.07□□□□□ -0.16
CHMP6-202ENST00000571457 GPRC5AQ8NFJ5 357 aa14.07□□□□□ -0.16
CHMP6-202ENST00000571457 DNAH12Q6ZR08 3092 aa14.06□□□□□ -0.16
CHMP6-202ENST00000571457 RASGRF1Q13972 1273 aa14.06□□□□□ -0.16
CHMP6-202ENST00000571457 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
CHMP6-202ENST00000571457 TMOD4Q9NZQ9 345 aa14.06□□□□□ -0.16
CHMP6-202ENST00000571457 COL2A1P02458 1487 aaPredicted RBP14.06□□□□□ -0.16
CHMP6-202ENST00000571457 SPTBN5Q9NRC6 3674 aaKnown RBP14.05□□□□□ -0.16
CHMP6-202ENST00000571457 FAM196BA6NMK8 535 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 LDHCP07864 332 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 HOXA7P31268 230 aaPredicted RBP14.05□□□□□ -0.16
CHMP6-202ENST00000571457 RGS2P41220 211 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 RHBDL3P58872 404 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 GSTO1P78417 241 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 CACNB2Q08289 660 aaPredicted RBP14.05□□□□□ -0.16
CHMP6-202ENST00000571457 LRRC26Q2I0M4 334 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 ZNF697Q5TEC3 545 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 GTF3C2Q8WUA4 911 aaPredicted RBP14.05□□□□□ -0.16
CHMP6-202ENST00000571457 WDR18Q9BV38 432 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 HERC5Q9UII4 1024 aaKnown RBP14.05□□□□□ -0.16
CHMP6-202ENST00000571457 HDAC5Q9UQL6 1122 aa14.05□□□□□ -0.16
CHMP6-202ENST00000571457 PLXNB2O15031 1838 aa14.04□□□□□ -0.16
CHMP6-202ENST00000571457 UBTFL1P0CB47 393 aaPredicted RBP14.04□□□□□ -0.16
CHMP6-202ENST00000571457 BACE1P56817 501 aa14.04□□□□□ -0.16
CHMP6-202ENST00000571457 HERVK_113P62684 666 aa14.04□□□□□ -0.16
CHMP6-202ENST00000571457 MECOMQ03112 1051 aa14.04□□□□□ -0.16
CHMP6-202ENST00000571457 LHX8Q68G74 356 aa14.04□□□□□ -0.16
CHMP6-202ENST00000571457 P2RX7Q99572 595 aaKnown RBP14.04□□□□□ -0.16
CHMP6-202ENST00000571457 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
CHMP6-202ENST00000571457 C19orf81C9J6K1 198 aa14.03□□□□□ -0.16
CHMP6-202ENST00000571457 ASNSP08243 561 aa14.03□□□□□ -0.16
CHMP6-202ENST00000571457 ADORA1P30542 326 aa14.03□□□□□ -0.16
CHMP6-202ENST00000571457 MTMR2Q13614 643 aa14.03□□□□□ -0.16
CHMP6-202ENST00000571457 MVPQ14764 893 aaKnown RBP14.03□□□□□ -0.16
CHMP6-202ENST00000571457 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
CHMP6-202ENST00000571457 APBA2Q99767 749 aa14.03□□□□□ -0.16
CHMP6-202ENST00000571457 CWC22Q9HCG8 908 aaKnown RBP14.03□□□□□ -0.16
CHMP6-202ENST00000571457 ATAD5Q96QE3 1844 aa14.02□□□□□ -0.16
CHMP6-202ENST00000571457 GLRX3O76003 335 aaKnown RBP14.02□□□□□ -0.17
CHMP6-202ENST00000571457 CCND3P30281 292 aaPredicted RBP14.02□□□□□ -0.17
CHMP6-202ENST00000571457 USP6NLQ92738 828 aa14.02□□□□□ -0.17
CHMP6-202ENST00000571457 DHX36Q9H2U1 1008 aaKnown RBP14.02□□□□□ -0.17
CHMP6-202ENST00000571457 TXNRD2Q9NNW7 524 aa14.02□□□□□ -0.17
CHMP6-202ENST00000571457 GINM1Q9NU53 330 aa14.02□□□□□ -0.17
CHMP6-202ENST00000571457 PI4KBQ9UBF8 816 aa14.02□□□□□ -0.17
CHMP6-202ENST00000571457 AKAP2Q9Y2D5 859 aa14.02□□□□□ -0.17
CHMP6-202ENST00000571457 PRUNE2Q8WUY3 3088 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 MSCO60682 206 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 TIMM10P62072 90 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 ERVK-9P63128 1117 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 ERVK-24P63145 666 aa14.01□□□□□ -0.17
CHMP6-202ENST00000571457 MORN1Q5T089 497 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms