RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
LITAF-206ENST00000571277 AATFQ9NY61 560 aaKnown RBP eCLIP13.92□□□□□ -0.18
LITAF-206ENST00000571277 MGAMO43451 1857 aa13.92□□□□□ -0.18
LITAF-206ENST00000571277 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 SLC34A2O95436 690 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 EN2P19622 333 aaPredicted RBP13.91□□□□□ -0.18
LITAF-206ENST00000571277 PSMC4P43686 418 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 PRMT2P55345 433 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 SH3TC2Q8TF17 1288 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 PARK7Q99497 189 aaKnown RBP13.91□□□□□ -0.18
LITAF-206ENST00000571277 SRRDQ9UH36 339 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 SLC45A1Q9Y2W3 748 aa13.91□□□□□ -0.18
LITAF-206ENST00000571277 IGSF3O75054 1194 aa13.9□□□□□ -0.18
LITAF-206ENST00000571277 ECM2O94769 699 aaPredicted RBP13.9□□□□□ -0.18
LITAF-206ENST00000571277 OSBPP22059 807 aa13.9□□□□□ -0.18
LITAF-206ENST00000571277 CAP2P40123 477 aa13.9□□□□□ -0.18
LITAF-206ENST00000571277 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
LITAF-206ENST00000571277 NBPF11Q86T75 865 aa13.9□□□□□ -0.18
LITAF-206ENST00000571277 METTL16Q86W50 562 aaKnown RBP13.9□□□□□ -0.18
LITAF-206ENST00000571277 DNAJC18Q9H819 358 aa13.9□□□□□ -0.18
LITAF-206ENST00000571277 HERC5Q9UII4 1024 aaKnown RBP13.9□□□□□ -0.18
LITAF-206ENST00000571277 FLT1P17948 1338 aa13.9□□□□□ -0.19
LITAF-206ENST00000571277 BAG3O95817 575 aa13.89□□□□□ -0.19
LITAF-206ENST00000571277 PLCG2P16885 1265 aa13.89□□□□□ -0.19
LITAF-206ENST00000571277 JAG1P78504 1218 aa13.89□□□□□ -0.19
LITAF-206ENST00000571277 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
LITAF-206ENST00000571277 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
LITAF-206ENST00000571277 PI4KBQ9UBF8 816 aa13.89□□□□□ -0.19
LITAF-206ENST00000571277 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
LITAF-206ENST00000571277 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
LITAF-206ENST00000571277 SPP2Q13103 211 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 TREML2Q5T2D2 321 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 ERC1Q8IUD2 1116 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 MAPKAPK5Q8IW41 473 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 SIRT2Q8IXJ6 389 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 NOL10Q9BSC4 688 aaKnown RBP13.88□□□□□ -0.19
LITAF-206ENST00000571277 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
LITAF-206ENST00000571277 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
LITAF-206ENST00000571277 CYP7A1P22680 504 aa13.87□□□□□ -0.19
LITAF-206ENST00000571277 DYNLL1P63167 89 aaKnown RBP13.87□□□□□ -0.19
LITAF-206ENST00000571277 SHROOM1Q2M3G4 852 aaPredicted RBP13.87□□□□□ -0.19
LITAF-206ENST00000571277 AACSQ86V21 672 aa13.87□□□□□ -0.19
LITAF-206ENST00000571277 PROCA1Q8NCQ7 364 aaPredicted RBP13.87□□□□□ -0.19
LITAF-206ENST00000571277 RHPN1Q8TCX5 695 aa13.87□□□□□ -0.19
LITAF-206ENST00000571277 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
LITAF-206ENST00000571277 PALD1Q9ULE6 856 aa13.87□□□□□ -0.19
LITAF-206ENST00000571277 MYPNQ86TC9 1320 aa13.87□□□□□ -0.19
LITAF-206ENST00000571277 MYH1P12882 1939 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 USP17L5A8MUK1 530 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 IDH1O75874 414 aaKnown RBP13.86□□□□□ -0.19
LITAF-206ENST00000571277 MYCP01106 439 aaPredicted RBP13.86□□□□□ -0.19
LITAF-206ENST00000571277 MS4A1P11836 297 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 HOXD10P28358 340 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 HMGCS2P54868 508 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 FCGRTP55899 365 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 PRKCZQ05513 592 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 MTFR1Q15390 333 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 TBC1D2Q9BYX2 928 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 IL1RAPL2Q9NP60 686 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 GABRQQ9UN88 632 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 DDX60LQ5H9U9 1706 aaKnown RBP13.86□□□□□ -0.19
LITAF-206ENST00000571277 DOCK3Q8IZD9 2030 aa13.86□□□□□ -0.19
LITAF-206ENST00000571277 GRK4P32298 578 aa13.85□□□□□ -0.19
LITAF-206ENST00000571277 SLC4A8Q2Y0W8 1093 aa13.85□□□□□ -0.19
LITAF-206ENST00000571277 HSP90AB4PQ58FF6 505 aa13.85□□□□□ -0.19
LITAF-206ENST00000571277 FOXP4Q8IVH2 680 aaPredicted RBP13.85□□□□□ -0.19
LITAF-206ENST00000571277 RPAP2Q8IXW5 612 aaPredicted RBP13.85□□□□□ -0.19
LITAF-206ENST00000571277 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
LITAF-206ENST00000571277 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
LITAF-206ENST00000571277 SMCR8Q8TEV9 937 aaPredicted RBP13.85□□□□□ -0.19
LITAF-206ENST00000571277 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
LITAF-206ENST00000571277 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
LITAF-206ENST00000571277 CEP290O15078 2479 aa13.84□□□□□ -0.19
LITAF-206ENST00000571277 RAET1EQ8TD07 263 aa13.84□□□□□ -0.19
LITAF-206ENST00000571277 SHISA4Q96DD7 197 aa13.84□□□□□ -0.19
LITAF-206ENST00000571277 SAP30BPQ9UHR5 308 aaKnown RBP13.84□□□□□ -0.19
LITAF-206ENST00000571277 RCAN3Q9UKA8 241 aa13.84□□□□□ -0.19
LITAF-206ENST00000571277 ASNSP08243 561 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 FLT3LGP49771 235 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 BACE1P56817 501 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 MTMR2Q13614 643 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 FAM110CQ1W6H9 321 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
LITAF-206ENST00000571277 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 ANKRD13CQ8N6S4 541 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 KIF1BPQ96EK5 621 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
LITAF-206ENST00000571277 ASCC2Q9H1I8 757 aaPredicted RBP13.83□□□□□ -0.2
LITAF-206ENST00000571277 AS3MTQ9HBK9 375 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 PNMA3Q9UL41 463 aa13.83□□□□□ -0.2
LITAF-206ENST00000571277 GDF11O95390 407 aa13.82□□□□□ -0.2
LITAF-206ENST00000571277 CCL5P13501 91 aa13.82□□□□□ -0.2
LITAF-206ENST00000571277 MAP3K12Q12852 859 aa13.82□□□□□ -0.2
LITAF-206ENST00000571277 C20orf194Q5TEA3 1177 aa13.82□□□□□ -0.2
LITAF-206ENST00000571277 CLASRPQ8N2M8 674 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms