RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 STOX1Q6ZVD7 989 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 C16orf86Q6ZW13 317 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 USP50Q70EL3 339 aaPredicted RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 TBC1D10CQ8IV04 446 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 ZSCAN29Q8IWY8 852 aaPredicted RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 ZC3H15Q8WU90 426 aaKnown RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 TTC14Q96N46 770 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 UPF3BQ9BZI7 483 aaKnown RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 TOMM22Q9NS69 142 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 SAP30BPQ9UHR5 308 aaKnown RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 HERC5Q9UII4 1024 aaKnown RBP14.07□□□□□ -0.16
CDRT1-206ENST00000571263 HACL1Q9UJ83 578 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 PPP2R3BQ9Y5P8 575 aa14.07□□□□□ -0.16
CDRT1-206ENST00000571263 NAV1Q8NEY1 1877 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 PLCD1P51178 756 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 TBC1D10BQ4KMP7 808 aaPredicted RBP14.06□□□□□ -0.16
CDRT1-206ENST00000571263 SAMD7Q7Z3H4 446 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 PNMA8AQ86V59 439 aaPredicted RBP14.06□□□□□ -0.16
CDRT1-206ENST00000571263 METTL16Q86W50 562 aaKnown RBP14.06□□□□□ -0.16
CDRT1-206ENST00000571263 MB21D2Q8IYB1 491 aaPredicted RBP14.06□□□□□ -0.16
CDRT1-206ENST00000571263 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 VEZTQ9HBM0 779 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 DDX4Q9NQI0 724 aaKnown RBP14.06□□□□□ -0.16
CDRT1-206ENST00000571263 ZSWIM5Q9P217 1185 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 LIMCH1Q9UPQ0 1083 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDRT1-206ENST00000571263 PCDHAC2Q9Y5I4 1007 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 PITPNM2Q9BZ72 1349 aa14.06□□□□□ -0.16
CDRT1-206ENST00000571263 CLRN2A0PK11 232 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 TCP10L2B9ZVM9 353 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
CDRT1-206ENST00000571263 PRC1O43663 620 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 TBC1D12O60347 775 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 CDK8P49336 464 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 GABPAQ06546 454 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 TCP10Q12799 353 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
CDRT1-206ENST00000571263 AGXT2Q9BYV1 514 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 TCP11L1Q9NUJ3 509 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 TAF6LQ9Y6J9 622 aa14.05□□□□□ -0.16
CDRT1-206ENST00000571263 LAMB1P07942 1786 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 CDK5RAP2Q96SN8 1893 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 B4E1Z4 1266 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 RANBP6O60518 1105 aaKnown RBP14.04□□□□□ -0.16
CDRT1-206ENST00000571263 KDM4AO75164 1064 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 CYP2D6P10635 497 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 EPS15P42566 896 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 LIFRP42702 1097 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 RRP12Q5JTH9 1297 aaKnown RBP14.04□□□□□ -0.16
CDRT1-206ENST00000571263 Q6ZUG5 572 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 UBAC1Q9BSL1 405 aa14.04□□□□□ -0.16
CDRT1-206ENST00000571263 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
CDRT1-206ENST00000571263 DDX60LQ5H9U9 1706 aaKnown RBP14.04□□□□□ -0.16
CDRT1-206ENST00000571263 MYH1P12882 1939 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 TSPY3P0CV98 308 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 TSPY8P0CW00 308 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 CACNB3P54284 484 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 AK2P54819 239 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 EVCP57679 992 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 DCPSQ96C86 337 aaKnown RBP14.03□□□□□ -0.16
CDRT1-206ENST00000571263 CSRNP1Q96S65 589 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 ANGEL1Q9UNK9 670 aaKnown RBP14.03□□□□□ -0.16
CDRT1-206ENST00000571263 NEDD4P46934 1319 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 ADAMTSL1Q8N6G6 1762 aa14.03□□□□□ -0.16
CDRT1-206ENST00000571263 BAZ2AQ9UIF9 1905 aaKnown RBP14.03□□□□□ -0.16
CDRT1-206ENST00000571263 SCN4AP35499 1836 aa14.02□□□□□ -0.16
CDRT1-206ENST00000571263 CNTNAP1P78357 1384 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 SHTN1A0MZ66 631 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 DDTLA6NHG4 134 aaPredicted RBP14.02□□□□□ -0.17
CDRT1-206ENST00000571263 IFIT3O14879 490 aaKnown RBP14.02□□□□□ -0.17
CDRT1-206ENST00000571263 EPHX2P34913 555 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 TFAP4Q01664 338 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 MAP3K10Q02779 954 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 RASA3Q14644 834 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 PPP2R5BQ15173 497 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 SUPT20HL1Q3ZLR7 823 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 DGKHQ86XP1 1220 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 ZFPM1Q8IX07 1006 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 DYNLL2Q96FJ2 89 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 ZNF274Q96GC6 653 aaPredicted RBP14.02□□□□□ -0.17
CDRT1-206ENST00000571263 ZSCAN10Q96SZ4 725 aaPredicted RBP14.02□□□□□ -0.17
CDRT1-206ENST00000571263 DEFB129Q9H1M3 183 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 GINM1Q9NU53 330 aa14.02□□□□□ -0.17
CDRT1-206ENST00000571263 CPA1P15085 419 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 RASA1P20936 1047 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 RCAN1P53805 252 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 WTAPQ15007 396 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 TMEM67Q5HYA8 995 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
CDRT1-206ENST00000571263 DCAF15Q66K64 600 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 TATDN1Q6P1N9 297 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 SH3BP5LQ7L8J4 393 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms