RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 LEMD3Q9Y2U8 911 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 CSADQ9Y600 493 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 TACC3Q9Y6A5 838 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 GFRA2O00451 464 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 FOSL1P15407 271 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 SEPT6Q14141 434 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 TSNAXIP1Q2TAA8 658 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 DUSP27Q5VZP5 1158 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.91□□□□□ -1.3
NUP88-202ENST00000570937 KCT2Q8NC54 265 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 RHOVQ96L33 236 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 LGR6Q9HBX8 967 aa6.91□□□□□ -1.3
NUP88-202ENST00000570937 SPINK2P20155 84 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 SSTR4P31391 388 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 LMNB2Q03252 620 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 CDK5R2Q13319 367 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 WIPI1Q5MNZ9 446 aaPredicted RBP6.9□□□□□ -1.3
NUP88-202ENST00000570937 ZNF765Q7L2R6 523 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 ERMP1Q7Z2K6 904 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 DTX1Q86Y01 620 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 ZNF507Q8TCN5 953 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 TMEM74Q96NL1 305 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 WNT10AQ9GZT5 417 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 SSU72Q9NP77 194 aaKnown RBP6.9□□□□□ -1.3
NUP88-202ENST00000570937 PICK1Q9NRD5 415 aa6.9□□□□□ -1.3
NUP88-202ENST00000570937 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
NUP88-202ENST00000570937 CAP2P40123 477 aa6.89□□□□□ -1.31
NUP88-202ENST00000570937 CDK8P49336 464 aa6.89□□□□□ -1.31
NUP88-202ENST00000570937 RPL6Q02878 288 aaKnown RBP6.89□□□□□ -1.31
NUP88-202ENST00000570937 CAMK2GQ13555 558 aaPredicted RBP6.89□□□□□ -1.31
NUP88-202ENST00000570937 MSMPQ1L6U9 139 aa6.89□□□□□ -1.31
NUP88-202ENST00000570937 CYP27C1Q4G0S4 372 aa6.89□□□□□ -1.31
NUP88-202ENST00000570937 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
NUP88-202ENST00000570937 PCMTD2Q9NV79 361 aa6.89□□□□□ -1.31
NUP88-202ENST00000570937 PRAMEF27A3QJZ7 478 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 CYP26A1O43174 497 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 PF4P02776 101 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 FAM87AP0C7U9 286 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 VAMP1P23763 118 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 CDC37L1Q7L3B6 337 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 UBE3DQ7Z6J8 389 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 NBPF11Q86T75 865 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 DUSP23Q9BVJ7 150 aa6.88□□□□□ -1.31
NUP88-202ENST00000570937 FAM221AA4D161 298 aa6.87□□□□□ -1.31
NUP88-202ENST00000570937 CILPO75339 1184 aa6.87□□□□□ -1.31
NUP88-202ENST00000570937 GBP2P32456 591 aaPredicted RBP6.87□□□□□ -1.31
NUP88-202ENST00000570937 DIEXFQ68CQ4 756 aaKnown RBP6.87□□□□□ -1.31
NUP88-202ENST00000570937 RGS22Q8NE09 1264 aa6.87□□□□□ -1.31
NUP88-202ENST00000570937 GATAD2BQ8WXI9 593 aa6.87□□□□□ -1.31
NUP88-202ENST00000570937 KCNQ5Q9NR82 932 aa6.87□□□□□ -1.31
NUP88-202ENST00000570937 KBTBD4Q9NVX7 518 aa6.87□□□□□ -1.31
NUP88-202ENST00000570937 F6X3S4 739 aa6.86□□□□□ -1.31
NUP88-202ENST00000570937 LRIG2O94898 1065 aa6.86□□□□□ -1.31
NUP88-202ENST00000570937 GARTP22102 1010 aa6.86□□□□□ -1.31
NUP88-202ENST00000570937 SLBPQ14493 270 aaKnown RBP eCLIP6.86□□□□□ -1.31
NUP88-202ENST00000570937 BNC2Q6ZN30 1099 aaPredicted RBP6.86□□□□□ -1.31
NUP88-202ENST00000570937 HS2ST1Q7LGA3 356 aa6.86□□□□□ -1.31
NUP88-202ENST00000570937 HID1Q8IV36 788 aa6.86□□□□□ -1.31
NUP88-202ENST00000570937 JARID2Q92833 1246 aaPredicted RBP6.86□□□□□ -1.31
NUP88-202ENST00000570937 FBRSQ9HAH7 460 aa6.86□□□□□ -1.31
NUP88-202ENST00000570937 LEFTY1O75610 366 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 F13A1P00488 732 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 PRNPP04156 253 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 GRK4P32298 578 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 ETF1P62495 437 aaKnown RBP6.85□□□□□ -1.31
NUP88-202ENST00000570937 ARMCX6Q7L4S7 300 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 FAM214BQ7L5A3 538 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 TOP6BLQ8N6T0 577 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 TMEM87AQ8NBN3 555 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 BACH2Q9BYV9 841 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 FOXQ1Q9C009 403 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 MKNK2Q9HBH9 465 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 COPRSQ9NQ92 184 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 PRDM10Q9NQV6 1147 aa6.85□□□□□ -1.31
NUP88-202ENST00000570937 EIF4G1Q04637 1599 aaKnown RBP6.84□□□□□ -1.31
NUP88-202ENST00000570937 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
NUP88-202ENST00000570937 PDE4BQ07343 736 aa6.84□□□□□ -1.31
NUP88-202ENST00000570937 NKG7Q16617 165 aa6.84□□□□□ -1.31
NUP88-202ENST00000570937 MFSD2AQ8NA29 543 aa6.84□□□□□ -1.31
NUP88-202ENST00000570937 METTL5Q9NRN9 209 aaKnown RBP6.84□□□□□ -1.31
NUP88-202ENST00000570937 ZC3H7BQ9UGR2 993 aaKnown RBP6.84□□□□□ -1.31
NUP88-202ENST00000570937 GGT7Q9UJ14 662 aa6.84□□□□□ -1.31
NUP88-202ENST00000570937 ADAM30Q9UKF2 790 aa6.84□□□□□ -1.31
NUP88-202ENST00000570937 ROBO2Q9HCK4 1378 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 PRR36Q9H6K5 1346 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 IGF2BP3O00425 579 aaKnown RBP eCLIP6.83□□□□□ -1.32
NUP88-202ENST00000570937 GREM1O60565 184 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 BPNT1O95861 308 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 MPP2Q14168 576 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 SNAP47Q5SQN1 464 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 FAM196AQ6ZSG2 479 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
NUP88-202ENST00000570937 GOLM1Q8NBJ4 401 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 LRRC3Q9BY71 257 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 KRTAP9-9Q9BYP9 154 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 KRTAP9-4Q9BYQ2 154 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 LRRC4CQ9HCJ2 640 aa6.83□□□□□ -1.32
NUP88-202ENST00000570937 BSDC1Q9NW68 430 aaPredicted RBP6.83□□□□□ -1.32
NUP88-202ENST00000570937 ADAMTS4O75173 837 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms