RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 UBTFL1P0CB47 393 aaPredicted RBP11.86□□□□□ -0.51
MMP2-208ENST00000570308 GOLGA6DP0CG33 693 aa11.86□□□□□ -0.51
MMP2-208ENST00000570308 TRAF1Q13077 416 aa11.86□□□□□ -0.51
MMP2-208ENST00000570308 ZC3H12AQ5D1E8 599 aaKnown RBP11.86□□□□□ -0.51
MMP2-208ENST00000570308 DDX17Q92841 729 aaKnown RBP11.86□□□□□ -0.51
MMP2-208ENST00000570308 CRACR2AQ9BSW2 395 aa11.86□□□□□ -0.51
MMP2-208ENST00000570308 GOLGA6AQ9NYA3 693 aa11.86□□□□□ -0.51
MMP2-208ENST00000570308 RCOR1Q9UKL0 485 aa11.86□□□□□ -0.51
MMP2-208ENST00000570308 SAMM50Q9Y512 469 aa11.86□□□□□ -0.51
MMP2-208ENST00000570308 EIF3HO15372 352 aaKnown RBP eCLIP11.85□□□□□ -0.51
MMP2-208ENST00000570308 MYBL2P10244 700 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 ME1P48163 572 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 GOLGA8FQ08AF8 430 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 GOLGA8DPQ0D2H9 430 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 PDILTQ8N807 584 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 BORCS6Q96GS4 357 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 RABEP2Q9H5N1 569 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 NLRP2Q9NX02 1062 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 MEFVO15553 781 aaPredicted RBP11.85□□□□□ -0.51
MMP2-208ENST00000570308 MCM3P25205 808 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 STIM1Q13586 685 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 CCDC50Q8IVM0 306 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 ENGASEQ8NFI3 743 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 TJP1Q07157 1748 aa11.85□□□□□ -0.51
MMP2-208ENST00000570308 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
MMP2-208ENST00000570308 SMTNP53814 917 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 GNGT1P63211 74 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 ACTN3Q08043 901 aaPredicted RBP11.84□□□□□ -0.51
MMP2-208ENST00000570308 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 VSTM4Q8IW00 320 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 KCNB2Q92953 911 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
MMP2-208ENST00000570308 NDUFAB1O14561 156 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 CAND2O75155 1236 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 HSP90AB4PQ58FF6 505 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 ZNF526Q8TF50 670 aaPredicted RBP11.84□□□□□ -0.51
MMP2-208ENST00000570308 BRF1Q92994 677 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 IL1RAPL2Q9NP60 686 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 NWD2Q9ULI1 1742 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
MMP2-208ENST00000570308 CCDC175P0C221 793 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 STK3Q13188 491 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 SNCBQ16143 134 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 CCDC40Q4G0X9 1142 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 WDR93Q6P2C0 686 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 ZNF396Q96N95 335 aaPredicted RBP11.84□□□□□ -0.51
MMP2-208ENST00000570308 HPCAL4Q9UM19 191 aa11.84□□□□□ -0.51
MMP2-208ENST00000570308 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.84□□□□□ -0.51
MMP2-208ENST00000570308 BIN1O00499 593 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 IKBKBO14920 756 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 NLRP12P59046 1061 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 TMEM139Q8IV31 216 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 KIF9Q9HAQ2 790 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 MYO6Q9UM54 1294 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 CTAGE9A4FU28 777 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 A6NNZ2 444 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 SNUPNO95149 360 aaKnown RBP11.83□□□□□ -0.52
MMP2-208ENST00000570308 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
MMP2-208ENST00000570308 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 NCAPHQ15003 741 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 TUBB8Q3ZCM7 444 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
MMP2-208ENST00000570308 GGCXP38435 758 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 BLOC1S2Q6QNY1 142 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 RIN2Q8WYP3 895 aaPredicted RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 MRPS27Q92552 414 aaKnown RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 LZTFL1Q9NQ48 299 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 ZNF831Q5JPB2 1677 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 RREB1Q92766 1687 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 ZNF202O95125 648 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 SLC8A3P57103 927 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 PTH1RQ03431 593 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 WHAMMP3Q1A5X7 153 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 RNF187Q5TA31 235 aaPredicted RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 RSRC1Q96IZ7 334 aaKnown RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 DESI2Q9BSY9 194 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 EME2A4GXA9 379 aaPredicted RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 AP1G2O75843 785 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 PEX19P40855 299 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 PLCB4Q15147 1175 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 RCSD1Q6JBY9 416 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 CABLES1Q8TDN4 633 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 MICAL1Q8TDZ2 1067 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 SAAL1Q96ER3 474 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
MMP2-208ENST00000570308 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 ITGB4P16144 1822 aa11.82□□□□□ -0.52
MMP2-208ENST00000570308 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
MMP2-208ENST00000570308 ZNF569Q5MCW4 686 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms