RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	DOCK3	Q8IZD9	2030 aa		13.64	□□□□□ -0.23
CMC2-223	ENST00000570195	LAMA3	Q16787	3333 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	GPR75-ASB3	A0A0A6YYF3	556 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	ZBTB22	O15209	634 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	TBC1D12	O60347	775 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	HMGCS2	P54868	508 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	TFCP2	Q12800	502 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	NECAB2	Q7Z6G3	386 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	MEIS3	Q99687	375 aa		13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	PDS5A	Q29RF7	1337 aa	Known RBP	13.63	□□□□□ -0.23
CMC2-223	ENST00000570195	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	DLL1	O00548	723 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	CAPN2	P17655	700 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	TRIM32	Q13049	653 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	RRP1B	Q14684	758 aa	Known RBP	13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	PI16	Q6UXB8	463 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	TBC1D9	Q6ZT07	1266 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	C7orf61	Q8IZ16	206 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	ZNF280C	Q8ND82	737 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	NEUROD6	Q96NK8	337 aa		13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.62	□□□□□ -0.23
CMC2-223	ENST00000570195	ALPK3	Q96L96	1907 aa		13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	HMGCR	P04035	888 aa		13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	CAP2	P40123	477 aa		13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	GCLC	P48506	637 aa	Predicted RBP	13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	MVP	Q14764	893 aa	Known RBP	13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	NSUN4	Q96CB9	384 aa	Known RBP	13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	API5	Q9BZZ5	524 aa	Known RBP	13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	HMG20B	Q9P0W2	317 aa		13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	GJD2	Q9UKL4	321 aa		13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	HDAC5	Q9UQL6	1122 aa		13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	AKAP2	Q9Y2D5	859 aa		13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.61	□□□□□ -0.23
CMC2-223	ENST00000570195	SRGAP3	O43295	1099 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	LDHC	P07864	332 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	SYN1	P17600	705 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	1e-9	■■■□□ 15
CMC2-223	ENST00000570195	TEX11	Q8IYF3	940 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	ANKLE1	Q8NAG6	615 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	GDF15	Q99988	308 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	RNF39	Q9H2S5	420 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	HMX1	Q9NP08	348 aa	Predicted RBP	13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	RAI14	Q9P0K7	980 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	RPTOR	Q8N122	1335 aa		13.6	□□□□□ -0.23
CMC2-223	ENST00000570195	USP17L5	A8MUK1	530 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	PEX10	O60683	326 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	CYP2B6	P20813	491 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	GSTO1	P78417	241 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	GORAB	Q5T7V8	394 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	SPATA5	Q8NB90	893 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	TRIB2	Q92519	343 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	NBPF3	Q9H094	633 aa		13.59	□□□□□ -0.23
CMC2-223	ENST00000570195	LOC285556	D6RIA3	1793 aa		13.58	□□□□□ -0.23
CMC2-223	ENST00000570195	MNX1	P50219	401 aa	Predicted RBP	13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	CACNB1	Q02641	598 aa	Predicted RBP	13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	SH3D19	Q5HYK7	790 aa		13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	TBC1D2	Q9BYX2	928 aa		13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	C11orf49	Q9H6J7	331 aa		13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	AS3MT	Q9HBK9	375 aa		13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	MORF4L1	Q9UBU8	362 aa		13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	COL2A1	P02458	1487 aa	Predicted RBP	13.58	□□□□□ -0.24
CMC2-223	ENST00000570195	MAP4K4	O95819	1239 aa	Predicted RBP	13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	BMP8B	P34820	402 aa		13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	IRX3	P78415	501 aa	Predicted RBP	13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	MTMR2	Q13614	643 aa		13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	P2RX7	Q99572	595 aa	Known RBP	13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	LRP2BP	Q9P2M1	347 aa		13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	HERC5	Q9UII4	1024 aa	Known RBP	13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	COL6A3	P12111	3177 aa		13.57	□□□□□ -0.24
CMC2-223	ENST00000570195	ATAD5	Q96QE3	1844 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	GNAI3	P08754	354 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	PRKAR2A	P13861	404 aa	Known RBP	13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	ARID4A	P29374	1257 aa	Predicted RBP	13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	MCAM	P43121	646 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	MAGEA10	P43363	369 aa	Predicted RBP	13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	JAG1	P78504	1218 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	MTX1	Q13505	466 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.56	□□□□□ -0.24
CMC2-223	ENST00000570195		Q7L0L9	218 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	MAPKAPK5	Q8IW41	473 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	TRMT2A	Q8IZ69	625 aa	Known RBP	13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	TXNRD2	Q9NNW7	524 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	TMOD4	Q9NZQ9	345 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	OGDHL	Q9ULD0	1010 aa		13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	DDX60L	Q5H9U9	1706 aa	Known RBP	13.56	□□□□□ -0.24
CMC2-223	ENST00000570195	BACE1	P56817	501 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	HERVK_113	P62684	666 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	DEFB123	Q8N688	67 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	NUDT12	Q9BQG2	462 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	NOL10	Q9BSC4	688 aa	Known RBP	13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	WDR18	Q9BV38	432 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	DNAJC18	Q9H819	358 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	SNRK	Q9NRH2	765 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	PI4KB	Q9UBF8	816 aa		13.55	□□□□□ -0.24
CMC2-223	ENST00000570195	PFAS	O15067	1338 aa		13.55	□□□□□ -0.24

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