RNA–Protein interactions for RNA: ENST00000569961.5

CCDC187-203, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC187, Length 3,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-203ENST00000569961 RIOK1Q9BRS2 568 aaKnown RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 FAM217BQ9NTX9 383 aaPredicted RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 SSRP1Q08945 709 aaKnown RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 KIAA0825Q8IV33 1275 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 GRAMD1CQ8IYS0 662 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 ENAHQ8N8S7 591 aaPredicted RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 TFAP4Q01664 338 aa16.33■□□□□ 0.21
CCDC187-203ENST00000569961 KINO60870 393 aaKnown RBP16.33■□□□□ 0.2
CCDC187-203ENST00000569961 NBPF11Q86T75 865 aa16.33■□□□□ 0.2
CCDC187-203ENST00000569961 PLIN2Q99541 437 aa16.33■□□□□ 0.2
CCDC187-203ENST00000569961 CFAP45Q9UL16 551 aa16.33■□□□□ 0.2
CCDC187-203ENST00000569961 GRAPQ13588 217 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
CCDC187-203ENST00000569961 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 MYSM1Q5VVJ2 828 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 DIS3L2Q8IYB7 885 aaKnown RBP16.32■□□□□ 0.2
CCDC187-203ENST00000569961 ESR2Q92731 530 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 FOXN1O15353 648 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 CSPP1Q1MSJ5 1256 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
CCDC187-203ENST00000569961 C11orf57Q6ZUT1 292 aaPredicted RBP16.32■□□□□ 0.2
CCDC187-203ENST00000569961 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 GGA1Q9UJY5 639 aa16.32■□□□□ 0.2
CCDC187-203ENST00000569961 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
CCDC187-203ENST00000569961 CCDC192P0DO97 292 aa16.31■□□□□ 0.2
CCDC187-203ENST00000569961 USP49Q70CQ1 688 aa16.31■□□□□ 0.2
CCDC187-203ENST00000569961 FANCBQ8NB91 859 aa16.31■□□□□ 0.2
CCDC187-203ENST00000569961 SPATA31A6Q5VVP1 1343 aa16.31■□□□□ 0.2
CCDC187-203ENST00000569961 CCDC173Q0VFZ6 552 aa16.31■□□□□ 0.2
CCDC187-203ENST00000569961 EARS2Q5JPH6 523 aaKnown RBP16.31■□□□□ 0.2
CCDC187-203ENST00000569961 STAG2Q8N3U4 1231 aa16.31■□□□□ 0.2
CCDC187-203ENST00000569961 CRNKL1Q9BZJ0 848 aaKnown RBP16.31■□□□□ 0.2
CCDC187-203ENST00000569961 AKAP11Q9UKA4 1901 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 SPTLC2O15270 562 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 BTDP43251 543 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 ZNF165P49910 485 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 KIF23Q02241 960 aaPredicted RBP16.3■□□□□ 0.2
CCDC187-203ENST00000569961 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
CCDC187-203ENST00000569961 FILIP1Q7Z7B0 1213 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 ZSCAN29Q8IWY8 852 aaPredicted RBP16.3■□□□□ 0.2
CCDC187-203ENST00000569961 CD209Q9NNX6 404 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 BAZ2AQ9UIF9 1905 aaKnown RBP16.3■□□□□ 0.2
CCDC187-203ENST00000569961 WNT7AO00755 349 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 ZNF174Q15697 407 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
CCDC187-203ENST00000569961 EZH2Q15910 746 aaKnown RBP16.29■□□□□ 0.2
CCDC187-203ENST00000569961 KRT23Q9C075 422 aa16.29■□□□□ 0.2
CCDC187-203ENST00000569961 UBA5Q9GZZ9 404 aa16.29■□□□□ 0.2
CCDC187-203ENST00000569961 ZMYM6O95789 1325 aa16.29■□□□□ 0.2
CCDC187-203ENST00000569961 TEX11Q8IYF3 940 aa16.29■□□□□ 0.2
CCDC187-203ENST00000569961 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
CCDC187-203ENST00000569961 ZSCAN10Q96SZ4 725 aaPredicted RBP16.29■□□□□ 0.2
CCDC187-203ENST00000569961 NOL10Q9BSC4 688 aaKnown RBP16.29■□□□□ 0.2
CCDC187-203ENST00000569961 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
CCDC187-203ENST00000569961 PCDHB6Q9Y5E3 794 aa16.29■□□□□ 0.2
CCDC187-203ENST00000569961 BECN2A8MW95 431 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 ARID5BQ14865 1188 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 ZC3H12CQ9C0D7 883 aaKnown RBP16.28■□□□□ 0.2
CCDC187-203ENST00000569961 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 PAPPAQ13219 1627 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 TULP1O00294 542 aaPredicted RBP16.28■□□□□ 0.2
CCDC187-203ENST00000569961 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
CCDC187-203ENST00000569961 AGXT2Q9BYV1 514 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
CCDC187-203ENST00000569961 TSPY3P0CV98 308 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 TSPY8P0CW00 308 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 LRMPQ12912 555 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 ANO1Q5XXA6 986 aa16.28■□□□□ 0.2
CCDC187-203ENST00000569961 LLPHQ9BRT6 129 aaKnown RBP16.28■□□□□ 0.2
CCDC187-203ENST00000569961 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.2
CCDC187-203ENST00000569961 AFMP43652 599 aa16.27■□□□□ 0.2
CCDC187-203ENST00000569961 CATIPQ7Z7H3 387 aa16.27■□□□□ 0.2
CCDC187-203ENST00000569961 PNOCQ13519 176 aa16.27■□□□□ 0.19
CCDC187-203ENST00000569961 NTRK3Q16288 839 aa16.27■□□□□ 0.19
CCDC187-203ENST00000569961 ZNF804AQ7Z570 1209 aa16.27■□□□□ 0.19
CCDC187-203ENST00000569961 LRRC47Q8N1G4 583 aaKnown RBP16.27■□□□□ 0.19
CCDC187-203ENST00000569961 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.19
CCDC187-203ENST00000569961 TTF2Q9UNY4 1162 aaKnown RBP16.27■□□□□ 0.19
CCDC187-203ENST00000569961 XDHP47989 1333 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 DHX8Q14562 1220 aaKnown RBP16.26■□□□□ 0.19
CCDC187-203ENST00000569961 SLC10A5Q5PT55 438 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 LINC00301Q8NCQ3 95 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 TSC1Q92574 1164 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
CCDC187-203ENST00000569961 MROH7-TTC4A0A0A0MT08 1334 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 TAL1P17542 331 aaPredicted RBP16.26■□□□□ 0.19
CCDC187-203ENST00000569961 ZNF444Q8N0Y2 327 aaPredicted RBP16.26■□□□□ 0.19
CCDC187-203ENST00000569961 TMEM87BQ96K49 555 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 ZNF512BQ96KM6 892 aaPredicted RBP16.26■□□□□ 0.19
CCDC187-203ENST00000569961 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
CCDC187-203ENST00000569961 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
CCDC187-203ENST00000569961 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms