RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 MECOMQ03112 1051 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 CCDC183Q5T5S1 534 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 CCDC12Q8WUD4 166 aaPredicted RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 TRIM44Q96DX7 344 aaPredicted RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 FAM205AQ6ZU69 1335 aa7□□□□□ -1.29
CYLD-216ENST00000569891 B4E1Z4 1266 aa7□□□□□ -1.29
CYLD-216ENST00000569891 MFSD14BQ5SR56 506 aa7□□□□□ -1.29
CYLD-216ENST00000569891 LCORLQ8N3X6 602 aa7□□□□□ -1.29
CYLD-216ENST00000569891 SBF1O95248 1867 aa7□□□□□ -1.29
CYLD-216ENST00000569891 MROH7-TTC4A0A0A0MT08 1334 aa7□□□□□ -1.29
CYLD-216ENST00000569891 NPM3O75607 178 aaKnown RBP7□□□□□ -1.29
CYLD-216ENST00000569891 DEXIO95424 95 aa7□□□□□ -1.29
CYLD-216ENST00000569891 CPA1P15085 419 aa7□□□□□ -1.29
CYLD-216ENST00000569891 GPSM2P81274 684 aa7□□□□□ -1.29
CYLD-216ENST00000569891 HDLBPQ00341 1268 aaKnown RBP7□□□□□ -1.29
CYLD-216ENST00000569891 TRAF1Q13077 416 aa7□□□□□ -1.29
CYLD-216ENST00000569891 DDX60LQ5H9U9 1706 aaKnown RBP7□□□□□ -1.29
CYLD-216ENST00000569891 FOXD4L5Q5VV16 416 aaPredicted RBP7□□□□□ -1.29
CYLD-216ENST00000569891 COL23A1Q86Y22 540 aaPredicted RBP7□□□□□ -1.29
CYLD-216ENST00000569891 TBC1D16Q8TBP0 767 aa7□□□□□ -1.29
CYLD-216ENST00000569891 KCNG4Q8TDN1 519 aa7□□□□□ -1.29
CYLD-216ENST00000569891 FOXD4L4Q8WXT5 416 aaPredicted RBP7□□□□□ -1.29
CYLD-216ENST00000569891 KAT14Q9H8E8 782 aa7□□□□□ -1.29
CYLD-216ENST00000569891 MCM9Q9NXL9 1143 aa7□□□□□ -1.29
CYLD-216ENST00000569891 MTMR6Q9Y217 621 aa7□□□□□ -1.29
CYLD-216ENST00000569891 SRGNP10124 158 aa7□□□□□ -1.29
CYLD-216ENST00000569891 TEX11Q8IYF3 940 aa7□□□□□ -1.29
CYLD-216ENST00000569891 BICD2Q8TD16 824 aa7□□□□□ -1.29
CYLD-216ENST00000569891 FAM163AQ96GL9 167 aaPredicted RBP7□□□□□ -1.29
CYLD-216ENST00000569891 SWAP70Q9UH65 585 aa7□□□□□ -1.29
CYLD-216ENST00000569891 TTLL5Q6EMB2 1281 aa7□□□□□ -1.29
CYLD-216ENST00000569891 PTF1AQ7RTS3 328 aa7□□□□□ -1.29
CYLD-216ENST00000569891 TEKT1Q969V4 418 aa7□□□□□ -1.29
CYLD-216ENST00000569891 PYM1Q9BRP8 204 aaKnown RBP7□□□□□ -1.29
CYLD-216ENST00000569891 FIBPO43427 364 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 CCT2P78371 535 aaKnown RBP6.99□□□□□ -1.29
CYLD-216ENST00000569891 STK38Q15208 465 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 CAVIN1Q6NZI2 390 aaKnown RBP6.99□□□□□ -1.29
CYLD-216ENST00000569891 NSUN7Q8NE18 718 aaKnown RBP6.99□□□□□ -1.29
CYLD-216ENST00000569891 MAP3K14Q99558 947 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 AATFQ9NY61 560 aaKnown RBP eCLIP6.99□□□□□ -1.29
CYLD-216ENST00000569891 CALML3P27482 149 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 TPM4P67936 248 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 SCRN1Q12765 414 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 CCDC93Q567U6 631 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 APOA5Q6Q788 366 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 DDX11Q96FC9 970 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 TCEANC2Q96MN5 208 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 ZSCAN10Q96SZ4 725 aaPredicted RBP6.99□□□□□ -1.29
CYLD-216ENST00000569891 MRIQ9BWK5 157 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 GZF1Q9H116 711 aaPredicted RBP6.99□□□□□ -1.29
CYLD-216ENST00000569891 LMBRD1Q9NUN5 540 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 SIPA1L1O43166 1804 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 TSPY3P0CV98 308 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 TSPY8P0CW00 308 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 C3orf67Q6ZVT6 689 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 MICU3Q86XE3 530 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 CCDC148Q8NFR7 591 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 ALG1Q9BT22 464 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 MAST2Q6P0Q8 1798 aa6.99□□□□□ -1.29
CYLD-216ENST00000569891 IFNAR1P17181 557 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 ZNF445P59923 1031 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 DDR1Q08345 913 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 STOX1Q6ZVD7 989 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 DGKHQ86XP1 1220 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 NUP133Q8WUM0 1156 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 RNF26Q9BY78 433 aaPredicted RBP6.98□□□□□ -1.29
CYLD-216ENST00000569891 GOLGA6L6A8MZA4 724 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 USP17L21D6R901 530 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 KINO60870 393 aaKnown RBP6.98□□□□□ -1.29
CYLD-216ENST00000569891 YEATS4O95619 227 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 HHIPL2Q6UWX4 724 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 CCDC17Q96LX7 622 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 RIOK1Q9BRS2 568 aaKnown RBP6.98□□□□□ -1.29
CYLD-216ENST00000569891 LRRC2Q9BYS8 371 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 DHX36Q9H2U1 1008 aaKnown RBP6.98□□□□□ -1.29
CYLD-216ENST00000569891 TSPY26PQ9H489 355 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 CSMD1Q96PZ7 3565 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 ECM29Q5VYK3 1845 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 CCDC192P0DO97 292 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 GALNT17Q6IS24 598 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 ZNF654Q8IZM8 581 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 DOCK2Q92608 1830 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 BTDP43251 543 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 CCDC24Q8N4L8 307 aa6.98□□□□□ -1.29
CYLD-216ENST00000569891 DCP1AQ9NPI6 582 aaPredicted RBP6.98□□□□□ -1.29
CYLD-216ENST00000569891 AKAP11Q9UKA4 1901 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 GPR75-ASB3A0A0A6YYF3 556 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 hCG_1984214I3L0E3 225 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 CTDSPL2Q05D32 466 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 STRIP1Q5VSL9 837 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 USP48Q86UV5 1035 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 TBC1D10CQ8IV04 446 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 OGFOD1Q8N543 542 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 TTLL6Q8N841 843 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 ZNF713Q8N859 430 aaPredicted RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 NAT10Q9H0A0 1025 aaKnown RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 NUP62CLQ9H1M0 184 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms