RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 KIF16BQ96L93 1317 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 HMGCRP04035 888 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 BTDP43251 543 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 MDM2Q00987 491 aaPredicted RBP12.6□□□□□ -0.39
RPAP1-212ENST00000569829 MAP3K10Q02779 954 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 SHROOM1Q2M3G4 852 aaPredicted RBP12.6□□□□□ -0.39
RPAP1-212ENST00000569829 LRIT3Q3SXY7 679 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 ZNF384Q8TF68 577 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 UBE2OQ9C0C9 1292 aaKnown RBP12.6□□□□□ -0.39
RPAP1-212ENST00000569829 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
RPAP1-212ENST00000569829 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
RPAP1-212ENST00000569829 SLC45A1Q9Y2W3 748 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 GAKO14976 1311 aa12.6□□□□□ -0.39
RPAP1-212ENST00000569829 CTNND1O60716 968 aaKnown RBP12.59□□□□□ -0.39
RPAP1-212ENST00000569829 ENTPD3O75355 529 aa12.59□□□□□ -0.39
RPAP1-212ENST00000569829 HMGCS2P54868 508 aa12.59□□□□□ -0.39
RPAP1-212ENST00000569829 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
RPAP1-212ENST00000569829 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
RPAP1-212ENST00000569829 MIER1Q8N108 512 aa12.59□□□□□ -0.39
RPAP1-212ENST00000569829 GUCD1Q96NT3 240 aa12.59□□□□□ -0.39
RPAP1-212ENST00000569829 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
RPAP1-212ENST00000569829 ABCF2Q9UG63 623 aa12.59□□□□□ -0.39
RPAP1-212ENST00000569829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
RPAP1-212ENST00000569829 RPTORQ8N122 1335 aa12.59□□□□□ -0.39
RPAP1-212ENST00000569829 RHBDL3P58872 404 aa12.58□□□□□ -0.4
RPAP1-212ENST00000569829 JAG1P78504 1218 aa12.58□□□□□ -0.4
RPAP1-212ENST00000569829 LRRC26Q2I0M4 334 aa12.58□□□□□ -0.4
RPAP1-212ENST00000569829 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
RPAP1-212ENST00000569829 TXNRD2Q9NNW7 524 aa12.58□□□□□ -0.4
RPAP1-212ENST00000569829 OGDHLQ9ULD0 1010 aa12.58□□□□□ -0.4
RPAP1-212ENST00000569829 SALL1Q9NSC2 1324 aa12.58□□□□□ -0.4
RPAP1-212ENST00000569829 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
RPAP1-212ENST00000569829 CCND3P30281 292 aaPredicted RBP12.57□□□□□ -0.4
RPAP1-212ENST00000569829 TIMM10P62072 90 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 CCL14Q16627 93 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
RPAP1-212ENST00000569829 ANKLE1Q8NAG6 615 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 API5Q9BZZ5 524 aaKnown RBP12.57□□□□□ -0.4
RPAP1-212ENST00000569829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
RPAP1-212ENST00000569829 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
RPAP1-212ENST00000569829 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
RPAP1-212ENST00000569829 ATAD5Q96QE3 1844 aa12.56□□□□□ -0.4
RPAP1-212ENST00000569829 Q3C1V9 767 aa12.56□□□□□ -0.4
RPAP1-212ENST00000569829 PI16Q6UXB8 463 aa12.56□□□□□ -0.4
RPAP1-212ENST00000569829 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
RPAP1-212ENST00000569829 DZIP1Q86YF9 867 aaKnown RBP12.56□□□□□ -0.4
RPAP1-212ENST00000569829 P2RX7Q99572 595 aaKnown RBP12.56□□□□□ -0.4
RPAP1-212ENST00000569829 COL6A1P12109 1028 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 MECOMQ03112 1051 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 CACNB2Q08289 660 aaPredicted RBP12.55□□□□□ -0.4
RPAP1-212ENST00000569829 MAP3K21Q5TCX8 1036 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
RPAP1-212ENST00000569829 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 PORCNQ9H237 461 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
RPAP1-212ENST00000569829 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 PNMA3Q9UL41 463 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 MROH7-TTC4A0A0A0MT08 1334 aa12.55□□□□□ -0.4
RPAP1-212ENST00000569829 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
RPAP1-212ENST00000569829 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
RPAP1-212ENST00000569829 UBTFL1P0CB47 393 aaPredicted RBP12.54□□□□□ -0.4
RPAP1-212ENST00000569829 LHX8Q68G74 356 aa12.54□□□□□ -0.4
RPAP1-212ENST00000569829 SIPA1L1O43166 1804 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 GPR75-ASB3A0A0A6YYF3 556 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 ZBTB22O15209 634 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 TBC1D12O60347 775 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 CAP2P40123 477 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
RPAP1-212ENST00000569829 MTMR2Q13614 643 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
RPAP1-212ENST00000569829 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 MORF4L1Q9UBU8 362 aa12.53□□□□□ -0.4
RPAP1-212ENST00000569829 CIAO1O76071 339 aa12.52□□□□□ -0.41
RPAP1-212ENST00000569829 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
RPAP1-212ENST00000569829 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
RPAP1-212ENST00000569829 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
RPAP1-212ENST00000569829 XAGE2Q96GT9 111 aa12.52□□□□□ -0.41
RPAP1-212ENST00000569829 OSBPL5Q9H0X9 879 aaPredicted RBP12.52□□□□□ -0.41
RPAP1-212ENST00000569829 DNAJC18Q9H819 358 aa12.52□□□□□ -0.41
RPAP1-212ENST00000569829 FLRT1Q9NZU1 646 aa12.52□□□□□ -0.41
RPAP1-212ENST00000569829 A0A1B0GUL7 405 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 SEMA3EO15041 775 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 BCAR3O75815 825 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 GDF11O95390 407 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 GNAI3P08754 354 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 TRIM27P14373 513 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 CAPN2P17655 700 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 HERVK_113P62684 666 aa12.51□□□□□ -0.41
RPAP1-212ENST00000569829 TFCP2Q12800 502 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms