RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	ADORA1	P30542	326 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	INPP5B	P32019	993 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	ARSI	Q5FYB1	569 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	PRPF38B	Q5VTL8	546 aa	Known RBP	10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	ATF7IP	Q6VMQ6	1270 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	KCNV2	Q8TDN2	545 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	XAGE2	Q96GT9	111 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	ZCCHC17	Q9NP64	241 aa	Known RBP	10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	LRP2BP	Q9P2M1	347 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	BIN2	Q9UBW5	565 aa	Predicted RBP	10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	PCDHGA4	Q9Y5G9	962 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	SALL1	Q9NSC2	1324 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	DOCK2	Q92608	1830 aa		10.51	□□□□□ -0.73
SCAPER-223	ENST00000569784	BTBD19	C9JJ37	291 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	PDHX	O00330	501 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	TLR2	O60603	784 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	BTD	P43251	543 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	RGS3	P49796	1198 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	NFIA	Q12857	509 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	CCDC158	Q5M9N0	1113 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	TTC39A	Q5SRH9	613 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	ZKSCAN2	Q63HK3	967 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	GADL1	Q6ZQY3	521 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	RAET1E	Q8TD07	263 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	TRIM34	Q9BYJ4	488 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	CPA4	Q9UI42	421 aa		10.5	□□□□□ -0.73
SCAPER-223	ENST00000569784	ENTPD3	O75355	529 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	BCAR3	O75815	825 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	GNRH1	P01148	92 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	UQCRFS1P1	P0C7P4	283 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	LACTB	P83111	547 aa	Predicted RBP	10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	RASGRF1	Q13972	1273 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	FASTKD5	Q7L8L6	764 aa	Known RBP	10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	ITPRIP	Q8IWB1	547 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	PARK7	Q99497	189 aa	Known RBP	10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	PTCH2	Q9Y6C5	1203 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	MROH7-TTC4	A0A0A0MT08	1334 aa		10.49	□□□□□ -0.73
SCAPER-223	ENST00000569784	TRIM27	P14373	513 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	PSMC4	P43686	418 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	PRMT2	P55345	433 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	ANKRD23	Q86SG2	305 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	SCYL3	Q8IZE3	742 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	ZNF710	Q8N1W2	664 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	SPATA5	Q8NB90	893 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	GCC1	Q96CN9	775 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	FAM198A	Q9UFP1	575 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	ZHX2	Q9Y6X8	837 aa		10.48	□□□□□ -0.73
SCAPER-223	ENST00000569784	DPYSL4	O14531	572 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	SURF6	O75683	361 aa	Known RBP	10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	BAG3	O95817	575 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	EN2	P19622	333 aa	Predicted RBP	10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	FCGRT	P55899	365 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	MECOM	Q03112	1051 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	NOL9	Q5SY16	702 aa	Known RBP	10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	SH3TC2	Q8TF17	1288 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	TRIM47	Q96LD4	638 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	IDI2	Q9BXS1	227 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	BCL11A	Q9H165	835 aa		10.47	□□□□□ -0.73
SCAPER-223	ENST00000569784	TRIM75P	A6NK02	468 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	CXCL11	O14625	94 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	CTNND1	O60716	968 aa	Known RBP	10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	HOXB1	P14653	301 aa	Predicted RBP	10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	UBXN2A	P68543	259 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	MTX1	Q13505	466 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	NAA16	Q6N069	864 aa	Predicted RBP	10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	TBC1D9	Q6ZT07	1266 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	ZFPM1	Q8IX07	1006 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	TEX11	Q8IYF3	940 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	TMEM57	Q8N5G2	664 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	ARMC5	Q96C12	935 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	ARHGAP39	Q9C0H5	1083 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	HMG20B	Q9P0W2	317 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	ZNF112	Q9UJU3	913 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	GAK	O14976	1311 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	PDS5A	Q29RF7	1337 aa	Known RBP	10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	MYPN	Q86TC9	1320 aa		10.46	□□□□□ -0.73
SCAPER-223	ENST00000569784	DOCK1	Q14185	1865 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	PNMA6E	A0A0J9YXQ4	647 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	DDTL	A6NHG4	134 aa	Predicted RBP	10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	MAP4K4	O95819	1239 aa	Predicted RBP	10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	PTPRA	P18433	802 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	AS3MT	Q9HBK9	375 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	ZSWIM6	Q9HCJ5	1215 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	SNRK	Q9NRH2	765 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	PNMA3	Q9UL41	463 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	KCNH4	Q9UQ05	1017 aa		10.45	□□□□□ -0.74
SCAPER-223	ENST00000569784	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	GPR75-ASB3	A0A0A6YYF3	556 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	NUDT7	P0C024	238 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	CYP2C8	P10632	490 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	OSBP	P22059	807 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	GRK4	P32298	578 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	DIEXF	Q68CQ4	756 aa	Known RBP	10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	NKX2-3	Q8TAU0	364 aa		10.44	□□□□□ -0.74
SCAPER-223	ENST00000569784	MARVELD3	Q96A59	401 aa		10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms