RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 SGMS1Q86VZ5 419 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 PSMD1Q99460 953 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 SLC44A5Q8NCS7 719 aa12.83□□□□□ -0.35
PDXDC1-216ENST00000569715 TNKSO95271 1327 aa12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 FOSBP53539 338 aa12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 LLPHQ9BRT6 129 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 ROBO3Q96MS0 1386 aa12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 NMT2O60551 498 aa12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 PLCG2P16885 1265 aa12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 LIFRP42702 1097 aa12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-216ENST00000569715 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 ORC4O43929 436 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 F13A1P00488 732 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 CDC27P30260 824 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 CRKP46108 304 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 PICALMQ13492 652 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 WTAPQ15007 396 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 SEC23AQ15436 765 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 CERS3Q8IU89 383 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 ENAHQ8N8S7 591 aaPredicted RBP12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 TEKT1Q969V4 418 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 UBAC1Q9BSL1 405 aa12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
PDXDC1-216ENST00000569715 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 ZBTB43O43298 467 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 SART3Q15020 963 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 CDC42EP5Q6NZY7 148 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 HHIPL2Q6UWX4 724 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 FAM217BQ9NTX9 383 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 RAD17O75943 681 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 PCP11498 1178 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 SLC12A7Q9Y666 1083 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 PDE4BQ07343 736 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
PDXDC1-216ENST00000569715 ERICH2A1L162 156 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 GOLGA8AA7E2F4 631 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 CACNB3P54284 484 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 PDCP20941 246 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 NFIAQ12857 509 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 ZDHHC15Q96MV8 337 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 GDPD2Q9HCC8 539 aa12.8□□□□□ -0.36
PDXDC1-216ENST00000569715 PSMD14O00487 310 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 CPLX1O14810 134 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 RBM5P52756 815 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 AMOTL1Q8IY63 956 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 MTA3Q9BTC8 594 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 CD2APQ9Y5K6 639 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 TSPY2A6NKD2 308 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 NFKBIEO00221 500 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 TRAK2O60296 914 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 FAM173BQ6P4H8 233 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 PHKBQ93100 1093 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 LMBRD1Q9NUN5 540 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 NTRK3Q16288 839 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
PDXDC1-216ENST00000569715 MYH8P13535 1937 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 NID2Q14112 1375 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 RASA1P20936 1047 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 TFAP4Q01664 338 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 IL17RBQ9NRM6 502 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 GJB4Q9NTQ9 266 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 CNPY2Q9Y2B0 182 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 DHX16O60231 1041 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 IFIT1BQ5T764 474 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 C16orf86Q6ZW13 317 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 ZFPM1Q8IX07 1006 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 CMTR1Q8N1G2 835 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 ORC3Q9UBD5 711 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 GOLGA6L22H0YM25 854 aa12.78□□□□□ -0.36
PDXDC1-216ENST00000569715 PRPF40AO75400 957 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms