RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 CHGBP05060 677 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 GTF2A2P52657 109 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 IRX6P78412 446 aaPredicted RBP13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 FOXP4Q8IVH2 680 aaPredicted RBP13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 SCYL3Q8IZE3 742 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 BRI3BPQ8WY22 251 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 SIPA1L1O43166 1804 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 USP5P45974 858 aa13.38□□□□□ -0.27
SHCBP1-207ENST00000569702 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
SHCBP1-207ENST00000569702 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
SHCBP1-207ENST00000569702 DNAJC18Q9H819 358 aa13.38□□□□□ -0.27
SHCBP1-207ENST00000569702 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
SHCBP1-207ENST00000569702 KCNH4Q9UQ05 1017 aa13.38□□□□□ -0.27
SHCBP1-207ENST00000569702 MYH7P12883 1935 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 CCL15-CCL14A0A0B4J2E2 113 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 PTPRAP18433 802 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 PDE1AP54750 535 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 NUCB1Q02818 461 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 SNAPC2Q13487 334 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 RRP1BQ14684 758 aaKnown RBP13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 CCL15Q16663 113 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 PUS7LQ9H0K6 701 aaKnown RBP13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 EHD4Q9H223 541 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 R3HDMLQ9H3Y0 253 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 PICK1Q9NRD5 415 aa13.37□□□□□ -0.27
SHCBP1-207ENST00000569702 CASP8AP2Q9UKL3 1982 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 CXCL11O14625 94 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 MBD4O95243 580 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 HLA-DOAP06340 250 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 ZFYP08048 801 aaPredicted RBP13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 CETPP11597 493 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 CAP2P40123 477 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 MOGSQ13724 837 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 OTUD7BQ6GQQ9 843 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 B4GALNT3Q6L9W6 998 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 TTC6Q86TZ1 520 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 SDR42E1Q8WUS8 393 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 DCP1AQ9NPI6 582 aaPredicted RBP13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 AFG3L2Q9Y4W6 797 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 ZHX2Q9Y6X8 837 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 MYH1P12882 1939 aa13.36□□□□□ -0.27
SHCBP1-207ENST00000569702 RNF113AO15541 343 aaKnown RBP13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 PRKAB2O43741 272 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 PLCD1P51178 756 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 TATDN1Q6P1N9 297 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 FAM43AQ8N2R8 423 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 CRACR2BQ8N4Y2 399 aaPredicted RBP13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 APPBP2Q92624 585 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 OSBP2Q969R2 916 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 ZCCHC17Q9NP64 241 aaKnown RBP13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 ATP8A2Q9NTI2 1148 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 DOCK1Q14185 1865 aa13.35□□□□□ -0.27
SHCBP1-207ENST00000569702 BTBD19C9JJ37 291 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 GPR25O00155 361 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 JAG1P78504 1218 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 GABPAQ06546 454 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 SLC4A8Q2Y0W8 1093 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 STRBPQ96SI9 672 aaKnown RBP13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 GINM1Q9NU53 330 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 MCM9Q9NXL9 1143 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
SHCBP1-207ENST00000569702 A0A0G2JLL6 359 aaPredicted RBP13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 POLR3DP05423 398 aaPredicted RBP13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 CRHR2Q13324 411 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 PRRT2Q7Z6L0 340 aaPredicted RBP13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 TNS4Q8IZW8 715 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 EVI5LQ96CN4 794 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 PHIPQ8WWQ0 1821 aa13.33□□□□□ -0.28
SHCBP1-207ENST00000569702 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 ASNSP08243 561 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 SHMT1P34896 483 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 EVX2Q03828 476 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 ZMYM1Q5SVZ6 1142 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 GPAT2Q6NUI2 795 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 ANKRD23Q86SG2 305 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 ZNF280CQ8ND82 737 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 FSD1Q9BTV5 496 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 WDR18Q9BV38 432 aa13.32□□□□□ -0.28
SHCBP1-207ENST00000569702 TRIM75PA6NK02 468 aa13.31□□□□□ -0.28
SHCBP1-207ENST00000569702 USP17L5A8MUK1 530 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms