RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CCL15Q16663 113 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 SHROOM1Q2M3G4 852 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 GCC1Q96CN9 775 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 R3HDMLQ9H3Y0 253 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 RFX7Q2KHR2 1363 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 MYH1P12882 1939 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 TCRBV5S4A2TA0A5A2 114 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 IGF2BP3O00425 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 IRF6O14896 467 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 GDF11O95390 407 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 POLR3DP05423 398 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 CYP2D6P10635 497 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 ADD2P35612 726 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 SREBF2Q12772 1141 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 RRP1BQ14684 758 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 RIOK1Q9BRS2 568 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 FSD1Q9BTV5 496 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 PICK1Q9NRD5 415 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 ZHX2Q9Y6X8 837 aa10.9□□□□□ -0.66
GTF3C1-210ENST00000569394 MYH7P12883 1935 aa10.9□□□□□ -0.67
GTF3C1-210ENST00000569394 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.67
GTF3C1-210ENST00000569394 CYP2D7A0A087X1C5 515 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 MANSC4A6NHS7 340 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 TRIM75PA6NK02 468 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 ERC2O15083 957 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 SLC34A2O95436 690 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 ZBTB48P10074 688 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 TM4SF4P48230 202 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 DGKZQ13574 1117 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 ERO1BQ86YB8 467 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 PI4K2BQ8TCG2 481 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 SEC62Q99442 399 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 PTPN18Q99952 460 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 CRNKL1Q9BZJ0 848 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 PUS7LQ9H0K6 701 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 MCM9Q9NXL9 1143 aa10.89□□□□□ -0.67
GTF3C1-210ENST00000569394 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 SMIM22K7EJ46 135 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 M0R2C6 588 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 PLCD1P51178 756 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 GTF2A2P52657 109 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 GADL1Q6ZQY3 521 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 CHD1LQ86WJ1 897 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 SCYL3Q8IZE3 742 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 NAV1Q8NEY1 1877 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 BRI3BPQ8WY22 251 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 RILPL2Q969X0 211 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 PI4KBQ9UBF8 816 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 ZNF112Q9UJU3 913 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 SLC4A4Q9Y6R1 1079 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 FOCADQ5VW36 1801 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 ATRNL1Q5VV63 1379 aa10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-210ENST00000569394 TTC41PQ6P2S7 1318 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 SIPA1L1O43166 1804 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 ATAD5Q96QE3 1844 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 RNF113AO15541 343 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 APPP05067 770 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 PTPRAP18433 802 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 PDE1AP54750 535 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 JAG1P78504 1218 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 ZSCAN25Q6NSZ9 544 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 CCDC129Q6ZRS4 1044 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 SMC5Q8IY18 1101 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 KBTBD3Q8NAB2 608 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 RNF25Q96BH1 459 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 DYNLL2Q96FJ2 89 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 DHX36Q9H2U1 1008 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 DNAJC18Q9H819 358 aa10.87□□□□□ -0.67
GTF3C1-210ENST00000569394 MPHOSPH10O00566 681 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 CA12O43570 354 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 CTNND1O60716 968 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 NUCB1Q02818 461 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 PPATQ06203 517 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 SPP2Q13103 211 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 CRHR2Q13324 411 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 PPIL2Q13356 520 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 SNAPC2Q13487 334 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 ZYXQ15942 572 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 SKAP1Q86WV1 359 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 SLC44A5Q8NCS7 719 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 ZNF296Q8WUU4 475 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 OSBP2Q969R2 916 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 DCP1AQ9NPI6 582 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 DOCK1Q14185 1865 aa10.86□□□□□ -0.67
GTF3C1-210ENST00000569394 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 BTBD19C9JJ37 291 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 GPR25O00155 361 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 CETPP11597 493 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 CAP2P40123 477 aa10.85□□□□□ -0.67
GTF3C1-210ENST00000569394 NUBP1P53384 320 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms