RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZHX2Q9Y6X8 837 aa17.53■□□□□ 0.4
COMMD4-225ENST00000569245 FLT1P17948 1338 aa17.52■□□□□ 0.4
COMMD4-225ENST00000569245 OTOFQ9HC10 1997 aa17.52■□□□□ 0.4
COMMD4-225ENST00000569245 CTNND1O60716 968 aaKnown RBP17.52■□□□□ 0.4
COMMD4-225ENST00000569245 TAF1CQ15572 869 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-225ENST00000569245 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.4
COMMD4-225ENST00000569245 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-225ENST00000569245 EDC3Q96F86 508 aaKnown RBP17.52■□□□□ 0.4
COMMD4-225ENST00000569245 GPATCH3Q96I76 525 aa17.52■□□□□ 0.4
COMMD4-225ENST00000569245 ZFYVE28Q9HCC9 887 aa17.52■□□□□ 0.4
COMMD4-225ENST00000569245 MAGEB6P1A0A0J9YX57 407 aa17.51■□□□□ 0.39
COMMD4-225ENST00000569245 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
COMMD4-225ENST00000569245 PDE6AP16499 860 aa17.51■□□□□ 0.39
COMMD4-225ENST00000569245 PTPRAP18433 802 aa17.51■□□□□ 0.39
COMMD4-225ENST00000569245 HAUS7Q99871 368 aa17.51■□□□□ 0.39
COMMD4-225ENST00000569245 ECHDC1Q9NTX5 307 aa17.51■□□□□ 0.39
COMMD4-225ENST00000569245 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
COMMD4-225ENST00000569245 BTBD19C9JJ37 291 aa17.5■□□□□ 0.39
COMMD4-225ENST00000569245 HLA-DOAP06340 250 aa17.5■□□□□ 0.39
COMMD4-225ENST00000569245 SLC4A8Q2Y0W8 1093 aa17.5■□□□□ 0.39
COMMD4-225ENST00000569245 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.39
COMMD4-225ENST00000569245 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-225ENST00000569245 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
COMMD4-225ENST00000569245 KCNH4Q9UQ05 1017 aa17.5■□□□□ 0.39
COMMD4-225ENST00000569245 ZNF532Q9HCE3 1301 aa17.49■□□□□ 0.39
COMMD4-225ENST00000569245 CXCL11O14625 94 aa17.49■□□□□ 0.39
COMMD4-225ENST00000569245 FOXP4Q8IVH2 680 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-225ENST00000569245 COL2A1P02458 1487 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-225ENST00000569245 MAST2Q6P0Q8 1798 aa17.48■□□□□ 0.39
COMMD4-225ENST00000569245 TRIM75PA6NK02 468 aa17.48■□□□□ 0.39
COMMD4-225ENST00000569245 NUCB1Q02818 461 aa17.48■□□□□ 0.39
COMMD4-225ENST00000569245 ZCCHC17Q9NP64 241 aaKnown RBP17.48■□□□□ 0.39
COMMD4-225ENST00000569245 PDHXO00330 501 aa17.47■□□□□ 0.39
COMMD4-225ENST00000569245 SP3Q02447 781 aa17.47■□□□□ 0.39
COMMD4-225ENST00000569245 PKN2Q16513 984 aaKnown RBP17.47■□□□□ 0.39
COMMD4-225ENST00000569245 FASTKD5Q7L8L6 764 aaKnown RBP17.47■□□□□ 0.39
COMMD4-225ENST00000569245 ANKRD23Q86SG2 305 aa17.47■□□□□ 0.39
COMMD4-225ENST00000569245 CCDC84Q86UT8 332 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-225ENST00000569245 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
COMMD4-225ENST00000569245 RIOK1Q9BRS2 568 aaKnown RBP17.47■□□□□ 0.39
COMMD4-225ENST00000569245 CRNKL1Q9BZJ0 848 aaKnown RBP17.47■□□□□ 0.39
COMMD4-225ENST00000569245 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-225ENST00000569245 AFG3L2Q9Y4W6 797 aa17.47■□□□□ 0.39
COMMD4-225ENST00000569245 TCRBV5S4A2TA0A5A2 114 aa17.46■□□□□ 0.39
COMMD4-225ENST00000569245 CAP2P40123 477 aa17.46■□□□□ 0.39
COMMD4-225ENST00000569245 TSHZ3Q63HK5 1081 aa17.46■□□□□ 0.39
COMMD4-225ENST00000569245 GADL1Q6ZQY3 521 aa17.46■□□□□ 0.39
COMMD4-225ENST00000569245 CD99L2Q8TCZ2 262 aa17.46■□□□□ 0.39
COMMD4-225ENST00000569245 TRIM17Q9Y577 477 aa17.46■□□□□ 0.39
COMMD4-225ENST00000569245 DOCK2Q92608 1830 aa17.45■□□□□ 0.38
COMMD4-225ENST00000569245 A0A0G2JLL6 359 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-225ENST00000569245 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-225ENST00000569245 ADD2P35612 726 aa17.45■□□□□ 0.38
COMMD4-225ENST00000569245 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
COMMD4-225ENST00000569245 SLFNL1Q499Z3 407 aa17.45■□□□□ 0.38
COMMD4-225ENST00000569245 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
COMMD4-225ENST00000569245 ZSCAN25Q6NSZ9 544 aa17.45■□□□□ 0.38
COMMD4-225ENST00000569245 PRRT2Q7Z6L0 340 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-225ENST00000569245 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
COMMD4-225ENST00000569245 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
COMMD4-225ENST00000569245 USP17L5A8MUK1 530 aa17.44■□□□□ 0.38
COMMD4-225ENST00000569245 TLR2O60603 784 aa17.44■□□□□ 0.38
COMMD4-225ENST00000569245 SPP2Q13103 211 aa17.44■□□□□ 0.38
COMMD4-225ENST00000569245 LCORLQ8N3X6 602 aa17.44■□□□□ 0.38
COMMD4-225ENST00000569245 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
COMMD4-225ENST00000569245 MBD4O95243 580 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 GDF11O95390 407 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 ASNSP08243 561 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 MOGSQ13724 837 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 KIF22Q14807 665 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 FBXO46Q6PJ61 603 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-225ENST00000569245 METTL16Q86W50 562 aaKnown RBP17.43■□□□□ 0.38
COMMD4-225ENST00000569245 ZNF280CQ8ND82 737 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 SDR42E1Q8WUS8 393 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 PARK7Q99497 189 aaKnown RBP17.43■□□□□ 0.38
COMMD4-225ENST00000569245 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 DNAJC18Q9H819 358 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 EFCC1Q9HA90 598 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 AS3MTQ9HBK9 375 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 MCM9Q9NXL9 1143 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 CPA4Q9UI42 421 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 SERPINB13Q9UIV8 391 aa17.43■□□□□ 0.38
COMMD4-225ENST00000569245 MYO5AQ9Y4I1 1855 aaKnown RBP17.43■□□□□ 0.38
COMMD4-225ENST00000569245 ERC2O15083 957 aa17.42■□□□□ 0.38
COMMD4-225ENST00000569245 UBE3CQ15386 1083 aa17.42■□□□□ 0.38
COMMD4-225ENST00000569245 GPAT2Q6NUI2 795 aa17.42■□□□□ 0.38
COMMD4-225ENST00000569245 OTOP1Q7RTM1 612 aa17.42■□□□□ 0.38
COMMD4-225ENST00000569245 HPS5Q9UPZ3 1129 aa17.42■□□□□ 0.38
COMMD4-225ENST00000569245 TTC41PQ6P2S7 1318 aa17.42■□□□□ 0.38
COMMD4-225ENST00000569245 ECM2O94769 699 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-225ENST00000569245 CHGBP05060 677 aa17.41■□□□□ 0.38
COMMD4-225ENST00000569245 CYP2C8P10632 490 aa17.41■□□□□ 0.38
COMMD4-225ENST00000569245 OTUD7AQ8TE49 926 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-225ENST00000569245 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
COMMD4-225ENST00000569245 LNPKQ9C0E8 428 aa17.41■□□□□ 0.38
COMMD4-225ENST00000569245 EHD4Q9H223 541 aa17.41■□□□□ 0.38
COMMD4-225ENST00000569245 PRKAB2O43741 272 aa17.4■□□□□ 0.38
COMMD4-225ENST00000569245 MX1P20591 662 aa17.4■□□□□ 0.38
COMMD4-225ENST00000569245 PLCD1P51178 756 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms