RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 AATFQ9NY61 560 aaKnown RBP eCLIP15.73■□□□□ 0.11
TSC2-220ENST00000568238 MYH1P12882 1939 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 ADGRA2Q96PE1 1338 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 FAM196BA6NMK8 535 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 HSP90AB4PQ58FF6 505 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 C17orf99Q6UX52 265 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 FASTKD5Q7L8L6 764 aaKnown RBP15.72■□□□□ 0.11
TSC2-220ENST00000568238 AACSQ86V21 672 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 ARHGAP39Q9C0H5 1083 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 PIH1D3Q9NQM4 214 aaKnown RBP15.72■□□□□ 0.11
TSC2-220ENST00000568238 CPA4Q9UI42 421 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 AFG3L2Q9Y4W6 797 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 PTCH2Q9Y6C5 1203 aa15.72■□□□□ 0.11
TSC2-220ENST00000568238 FLT1P17948 1338 aa15.71■□□□□ 0.11
TSC2-220ENST00000568238 PPP4CP60510 307 aa15.71■□□□□ 0.11
TSC2-220ENST00000568238 SLC9C1Q4G0N8 1177 aa15.71■□□□□ 0.11
TSC2-220ENST00000568238 GPAT2Q6NUI2 795 aa15.71■□□□□ 0.11
TSC2-220ENST00000568238 GADL1Q6ZQY3 521 aa15.71■□□□□ 0.11
TSC2-220ENST00000568238 ADGRA1Q86SQ6 560 aa15.71■□□□□ 0.11
TSC2-220ENST00000568238 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.71■□□□□ 0.11
TSC2-220ENST00000568238 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
TSC2-220ENST00000568238 TRIM75PA6NK02 468 aa15.7■□□□□ 0.1
TSC2-220ENST00000568238 HMMRO75330 724 aa15.7■□□□□ 0.1
TSC2-220ENST00000568238 IDH1O75874 414 aaKnown RBP15.7■□□□□ 0.1
TSC2-220ENST00000568238 GNRH1P01148 92 aa15.7■□□□□ 0.1
TSC2-220ENST00000568238 SIRT2Q8IXJ6 389 aa15.7■□□□□ 0.1
TSC2-220ENST00000568238 RPAP2Q8IXW5 612 aaPredicted RBP15.7■□□□□ 0.1
TSC2-220ENST00000568238 DHX36Q9H2U1 1008 aaKnown RBP15.7■□□□□ 0.1
TSC2-220ENST00000568238 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 CYP2C8P10632 490 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 CCDC84Q86UT8 332 aaPredicted RBP15.69■□□□□ 0.1
TSC2-220ENST00000568238 MAPKAPK5Q8IW41 473 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 RHPN1Q8TCX5 695 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 TGFBRAP1Q8WUH2 860 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 PI4KBQ9UBF8 816 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 SLC45A1Q9Y2W3 748 aa15.69■□□□□ 0.1
TSC2-220ENST00000568238 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
TSC2-220ENST00000568238 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 CYP7A1P22680 504 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 PSMC4P43686 418 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 PRMT2P55345 433 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 NBPF11Q86T75 865 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 CERS3Q8IU89 383 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 MAGEB6Q8N7X4 407 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 KIF1BPQ96EK5 621 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 ZNF333Q96JL9 665 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 TRIM47Q96LD4 638 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 TBC1D2Q9BYX2 928 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 PCDHB15Q9Y5E8 787 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 NDUFB9Q9Y6M9 179 aa15.68■□□□□ 0.1
TSC2-220ENST00000568238 APBB1O00213 710 aa15.67■□□□□ 0.1
TSC2-220ENST00000568238 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
TSC2-220ENST00000568238 BCRP11274 1271 aa15.67■□□□□ 0.1
TSC2-220ENST00000568238 CAP2P40123 477 aa15.67■□□□□ 0.1
TSC2-220ENST00000568238 MAP3K12Q12852 859 aa15.67■□□□□ 0.1
TSC2-220ENST00000568238 TMED8Q6PL24 325 aaPredicted RBP15.67■□□□□ 0.1
TSC2-220ENST00000568238 CLASRPQ8N2M8 674 aaKnown RBP15.67■□□□□ 0.1
TSC2-220ENST00000568238 CRACR2BQ8N4Y2 399 aaPredicted RBP15.67■□□□□ 0.1
TSC2-220ENST00000568238 ZNF280CQ8ND82 737 aa15.67■□□□□ 0.1
TSC2-220ENST00000568238 TRIM34Q9BYJ4 488 aa15.67■□□□□ 0.1
TSC2-220ENST00000568238 AGTPBP1Q9UPW5 1226 aa15.67■□□□□ 0.1
TSC2-220ENST00000568238 MYH7P12883 1935 aa15.66■□□□□ 0.1
TSC2-220ENST00000568238 FMNL1O95466 1100 aaPredicted RBP15.66■□□□□ 0.1
TSC2-220ENST00000568238 HLA-DOAP06340 250 aa15.66■□□□□ 0.1
TSC2-220ENST00000568238 CTGFP29279 349 aa15.66■□□□□ 0.1
TSC2-220ENST00000568238 DYNLL1P63167 89 aaKnown RBP15.66■□□□□ 0.1
TSC2-220ENST00000568238 MIGA1Q8NAN2 632 aa15.66■□□□□ 0.1
TSC2-220ENST00000568238 PROCA1Q8NCQ7 364 aaPredicted RBP15.66■□□□□ 0.1
TSC2-220ENST00000568238 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
TSC2-220ENST00000568238 ANTXR1Q9H6X2 564 aa15.66■□□□□ 0.1
TSC2-220ENST00000568238 SRRDQ9UH36 339 aa15.66■□□□□ 0.1
TSC2-220ENST00000568238 USP17L5A8MUK1 530 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
TSC2-220ENST00000568238 OSBPP22059 807 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 HOXD10P28358 340 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 FCGRTP55899 365 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 SPP2Q13103 211 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 RRP1BQ14684 758 aaKnown RBP15.65■□□□□ 0.1
TSC2-220ENST00000568238 TTF1Q15361 905 aaPredicted RBP15.65■□□□□ 0.1
TSC2-220ENST00000568238 TREML2Q5T2D2 321 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 METTL16Q86W50 562 aaKnown RBP15.65■□□□□ 0.1
TSC2-220ENST00000568238 SH3TC2Q8TF17 1288 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 TMEM106CQ9BVX2 250 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 DNAJC18Q9H819 358 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 AS3MTQ9HBK9 375 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 SAP30BPQ9UHR5 308 aaKnown RBP15.65■□□□□ 0.1
TSC2-220ENST00000568238 PNMA3Q9UL41 463 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 PALD1Q9ULE6 856 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 MYPNQ86TC9 1320 aa15.65■□□□□ 0.1
TSC2-220ENST00000568238 RAB11FIP3O75154 756 aa15.64■□□□□ 0.09
TSC2-220ENST00000568238 ASNSP08243 561 aa15.64■□□□□ 0.09
TSC2-220ENST00000568238 USP5P45974 858 aa15.64■□□□□ 0.09
TSC2-220ENST00000568238 HMGCS2P54868 508 aa15.64■□□□□ 0.09
TSC2-220ENST00000568238 AAMPQ13685 434 aa15.64■□□□□ 0.09
TSC2-220ENST00000568238 PRPF38BQ5VTL8 546 aaKnown RBP15.64■□□□□ 0.09
TSC2-220ENST00000568238 RAET1EQ8TD07 263 aa15.64■□□□□ 0.09
TSC2-220ENST00000568238 MYCP01106 439 aaPredicted RBP15.63■□□□□ 0.09
TSC2-220ENST00000568238 NEFLP07196 543 aa15.63■□□□□ 0.09
TSC2-220ENST00000568238 EN2P19622 333 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms