RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 ECM1Q16610 540 aa7.73□□□□□ -1.17
CAPN3-218ENST00000568153 KCTD17Q8N5Z5 321 aa7.73□□□□□ -1.17
CAPN3-218ENST00000568153 SLC52A2Q9HAB3 445 aa7.73□□□□□ -1.17
CAPN3-218ENST00000568153 KCNH4Q9UQ05 1017 aa7.73□□□□□ -1.17
CAPN3-218ENST00000568153 PTPRCP08575 1304 aa7.73□□□□□ -1.17
CAPN3-218ENST00000568153 XIRP1Q702N8 1843 aaKnown RBP7.73□□□□□ -1.17
CAPN3-218ENST00000568153 ERVV-2B6SEH9 535 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 EXOC5O00471 708 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 CYP27B1O15528 508 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 KCNQ3O43525 872 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 FAM13AO94988 1023 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 IGHDP01880 384 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 EIF2S2P20042 333 aaKnown RBP7.72□□□□□ -1.17
CAPN3-218ENST00000568153 NOM1Q5C9Z4 860 aaKnown RBP7.72□□□□□ -1.17
CAPN3-218ENST00000568153 ZNF468Q5VIY5 522 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-218ENST00000568153 INTS3Q68E01 1043 aaKnown RBP7.72□□□□□ -1.17
CAPN3-218ENST00000568153 GLYCTKQ8IVS8 523 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 RGL4Q8IZJ4 473 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 DDX54Q8TDD1 881 aaKnown RBP7.72□□□□□ -1.17
CAPN3-218ENST00000568153 SLC30A3Q99726 388 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-218ENST00000568153 ZBTB40Q9NUA8 1239 aa7.72□□□□□ -1.17
CAPN3-218ENST00000568153 PHRF1Q9P1Y6 1649 aaKnown RBP7.71□□□□□ -1.17
CAPN3-218ENST00000568153 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 EPXP11678 715 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 MARSP56192 900 aaKnown RBP7.71□□□□□ -1.18
CAPN3-218ENST00000568153 ZNF790Q6PG37 636 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 GALNT6Q8NCL4 622 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 NEDD1Q8NHV4 660 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 EDARADDQ8WWZ3 215 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 USP35Q9P2H5 1018 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.18
CAPN3-218ENST00000568153 ABCC6O95255 1503 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.18
CAPN3-218ENST00000568153 CAMTA1Q9Y6Y1 1673 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 NEURL1BA8MQ27 555 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 RNF225M0QZC1 329 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-218ENST00000568153 EPB42P16452 691 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-218ENST00000568153 ADH6P28332 368 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 CCT4P50991 539 aaKnown RBP7.7□□□□□ -1.18
CAPN3-218ENST00000568153 ARHGAP4P98171 946 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 G2E3Q7L622 706 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 FCHSD1Q86WN1 690 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 TTC5Q8N0Z6 440 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 CMTR1Q8N1G2 835 aaKnown RBP7.7□□□□□ -1.18
CAPN3-218ENST00000568153 GPR152Q8TDT2 470 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-218ENST00000568153 KCNMB2Q9Y691 235 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 KDM2BQ8NHM5 1336 aa7.7□□□□□ -1.18
CAPN3-218ENST00000568153 PATL2C9JE40 543 aaKnown RBP7.69□□□□□ -1.18
CAPN3-218ENST00000568153 SNRPA1P09661 255 aaKnown RBP7.69□□□□□ -1.18
CAPN3-218ENST00000568153 PCBP4P57723 403 aaKnown RBP7.69□□□□□ -1.18
CAPN3-218ENST00000568153 SPEM2Q0P670 501 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 SLC39A6Q13433 755 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 HDAC1Q13547 482 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-218ENST00000568153 SLC4A10Q6U841 1118 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 RAB44Q7Z6P3 723 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-218ENST00000568153 FMNL2Q96PY5 1086 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 MDFIQ99750 246 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 DBF4Q9UBU7 674 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-218ENST00000568153 THRAP3Q9Y2W1 955 aaKnown RBP7.69□□□□□ -1.18
CAPN3-218ENST00000568153 ABCC4O15439 1325 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 LTN1O94822 1766 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 OVOS2A0A0G2JMS6 1433 aa7.69□□□□□ -1.18
CAPN3-218ENST00000568153 COL5A2P05997 1499 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-218ENST00000568153 FZD6O60353 706 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 SNRPNP63162 240 aaKnown RBP7.68□□□□□ -1.18
CAPN3-218ENST00000568153 RASSF7Q02833 373 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 DNM1Q05193 864 aaKnown RBP7.68□□□□□ -1.18
CAPN3-218ENST00000568153 TRIP4Q15650 581 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-218ENST00000568153 ALKBH2Q6NS38 261 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 PIK3R5Q8WYR1 880 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 EDEM1Q92611 657 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 GSX2Q9BZM3 304 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 CCDC87Q9NVE4 849 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 HYPKQ9NX55 129 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 FAM13BQ9NYF5 915 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 PRR12Q9ULL5 1215 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 CNTNAP5Q8WYK1 1306 aa7.68□□□□□ -1.18
CAPN3-218ENST00000568153 COL18A1P39060 1754 aa7.67□□□□□ -1.18
CAPN3-218ENST00000568153 F6X3S4 739 aa7.67□□□□□ -1.18
CAPN3-218ENST00000568153 IRS1P35568 1242 aa7.67□□□□□ -1.18
CAPN3-218ENST00000568153 CCINQ13939 588 aa7.67□□□□□ -1.18
CAPN3-218ENST00000568153 RPAP2Q8IXW5 612 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-218ENST00000568153 PHAXQ9H814 394 aaKnown RBP7.67□□□□□ -1.18
CAPN3-218ENST00000568153 DDX21Q9NR30 783 aaKnown RBP eCLIP7.67□□□□□ -1.18
CAPN3-218ENST00000568153 CHPF2Q9P2E5 772 aa7.67□□□□□ -1.18
CAPN3-218ENST00000568153 CCDC9Q9Y3X0 531 aaKnown RBP7.67□□□□□ -1.18
CAPN3-218ENST00000568153 HEG1Q9ULI3 1381 aa7.67□□□□□ -1.18
CAPN3-218ENST00000568153 MEGF6O75095 1541 aa7.67□□□□□ -1.18
CAPN3-218ENST00000568153 AHDC1Q5TGY3 1603 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-218ENST00000568153 XYLBO75191 536 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 DDX58O95786 925 aaKnown RBP7.66□□□□□ -1.18
CAPN3-218ENST00000568153 EGFRP00533 1210 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 PDGFAP04085 211 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 GNAI3P08754 354 aa7.66□□□□□ -1.18
CAPN3-218ENST00000568153 MZF1P28698 734 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-218ENST00000568153 SYT9Q86SS6 491 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms