RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 PICALMQ13492 652 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 UBE3CQ15386 1083 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 SLC9C2Q5TAH2 1124 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 TGFBRAP1Q8WUH2 860 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 GCC1Q96CN9 775 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 TBC1D2Q9BYX2 928 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 GINM1Q9NU53 330 aa9.94□□□□□ -0.82
HDGFL3-205ENST00000568129 SLURP2P0DP57 97 aa9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 RRP1BQ14684 758 aaKnown RBP9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 TATDN1Q6P1N9 297 aa9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 ZSCAN29Q8IWY8 852 aaPredicted RBP9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 SMC5Q8IY18 1101 aa9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 PI4K2BQ8TCG2 481 aa9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 ZNF296Q8WUU4 475 aaPredicted RBP9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 EDC3Q96F86 508 aaKnown RBP9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 EHD4Q9H223 541 aa9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 DNAJC18Q9H819 358 aa9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 STAP2Q9UGK3 403 aa9.93□□□□□ -0.82
HDGFL3-205ENST00000568129 ZNF532Q9HCE3 1301 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 CCL15-CCL14A0A0B4J2E2 113 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 A0A0G2JLL6 359 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 MAGEB6P1A0A0J9YX57 407 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 BTBD19C9JJ37 291 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 FKTNO75072 461 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 CAP2P40123 477 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 GABPAQ06546 454 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 PKN2Q16513 984 aaKnown RBP9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 CCL15Q16663 113 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 PRRT2Q7Z6L0 340 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 ANKRD23Q86SG2 305 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 MAPKAPK5Q8IW41 473 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 FAM43AQ8N2R8 423 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 PALD1Q9ULE6 856 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 SLC45A1Q9Y2W3 748 aa9.92□□□□□ -0.82
HDGFL3-205ENST00000568129 ADGRA2Q96PE1 1338 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 TLR2O60603 784 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 CRHR2Q13324 411 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 SH3D19Q5HYK7 790 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 GPAT2Q6NUI2 795 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 CTU1Q7Z7A3 348 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 KBTBD3Q8NAB2 608 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 MIGA1Q8NAN2 632 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 DNAJC2Q99543 621 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 WDR18Q9BV38 432 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 MCOLN1Q9GZU1 580 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 SUPT16HQ9Y5B9 1047 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 ZHX2Q9Y6X8 837 aa9.91□□□□□ -0.82
HDGFL3-205ENST00000568129 GLRX3O76003 335 aaKnown RBP9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 IGHDP01880 384 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 JAG1P78504 1218 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 C17orf99Q6UX52 265 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 FASTKD5Q7L8L6 764 aaKnown RBP9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 TTC6Q86TZ1 520 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 ABHD8Q96I13 439 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 GPATCH3Q96I76 525 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 RWDD1Q9H446 243 aaPredicted RBP9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 ZFYVE28Q9HCC9 887 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 DCP1AQ9NPI6 582 aaPredicted RBP9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 PICK1Q9NRD5 415 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 ATP8A2Q9NTI2 1148 aa9.9□□□□□ -0.82
HDGFL3-205ENST00000568129 GREB1LQ9C091 1923 aaPredicted RBP9.9□□□□□ -0.83
HDGFL3-205ENST00000568129 FAM196BA6NMK8 535 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 USP17L5A8MUK1 530 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 ERC2O15083 957 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 HLA-DOAP06340 250 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 ZFYP08048 801 aaPredicted RBP9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 ASNSP08243 561 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 USP5P45974 858 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 PLCD1P51178 756 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 CAP1Q01518 475 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 DGKZQ13574 1117 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 LCORLQ8N3X6 602 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 PROCA1Q8NCQ7 364 aaPredicted RBP9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 ZNF280CQ8ND82 737 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 EXOC6Q8TAG9 804 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 OTUD7AQ8TE49 926 aaPredicted RBP9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 STRBPQ96SI9 672 aaKnown RBP9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 CRNKL1Q9BZJ0 848 aaKnown RBP9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 PUS7LQ9H0K6 701 aaKnown RBP9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 SERPINB13Q9UIV8 391 aa9.89□□□□□ -0.83
HDGFL3-205ENST00000568129 CHGBP05060 677 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 MX1P20591 662 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 SHMT1P34896 483 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 PDE1AP54750 535 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 SP3Q02447 781 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 TAF1CQ15572 869 aaPredicted RBP9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 GIMAP6Q6P9H5 292 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 APPBP2Q92624 585 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 OSBP2Q969R2 916 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 ERO1AQ96HE7 468 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 SAP30BPQ9UHR5 308 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 ZSWIM8A7E2V4 1837 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms