RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 LHX8Q68G74 356 aa17.36■□□□□ 0.37
SMG1-213ENST00000567737 ZSCAN29Q8IWY8 852 aaPredicted RBP17.36■□□□□ 0.37
SMG1-213ENST00000567737 ZFPM1Q8IX07 1006 aa17.36■□□□□ 0.37
SMG1-213ENST00000567737 WDR66Q8TBY9 1149 aa17.36■□□□□ 0.37
SMG1-213ENST00000567737 PTPRFP10586 1907 aa17.35■□□□□ 0.37
SMG1-213ENST00000567737 GRM8O00222 908 aa17.35■□□□□ 0.37
SMG1-213ENST00000567737 XRCC5P13010 732 aaKnown RBP17.35■□□□□ 0.37
SMG1-213ENST00000567737 DIXDC1Q155Q3 683 aa17.35■□□□□ 0.37
SMG1-213ENST00000567737 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
SMG1-213ENST00000567737 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
SMG1-213ENST00000567737 MUC3AQ02505 3323 aa17.35■□□□□ 0.37
SMG1-213ENST00000567737 ENTPD3O75355 529 aa17.34■□□□□ 0.37
SMG1-213ENST00000567737 CCND3P30281 292 aaPredicted RBP17.34■□□□□ 0.37
SMG1-213ENST00000567737 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
SMG1-213ENST00000567737 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
SMG1-213ENST00000567737 C9orf50Q5SZB4 431 aa17.34■□□□□ 0.37
SMG1-213ENST00000567737 C9orf78Q9NZ63 289 aaPredicted RBP17.34■□□□□ 0.37
SMG1-213ENST00000567737 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.34■□□□□ 0.37
SMG1-213ENST00000567737 PDE8BO95263 885 aa17.33■□□□□ 0.36
SMG1-213ENST00000567737 RGS3P49796 1198 aa17.33■□□□□ 0.36
SMG1-213ENST00000567737 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.36
SMG1-213ENST00000567737 ASCC2Q9H1I8 757 aaPredicted RBP17.33■□□□□ 0.36
SMG1-213ENST00000567737 MORF4L1Q9UBU8 362 aa17.33■□□□□ 0.36
SMG1-213ENST00000567737 DOCK1Q14185 1865 aa17.33■□□□□ 0.36
SMG1-213ENST00000567737 DOCK2Q92608 1830 aa17.33■□□□□ 0.36
SMG1-213ENST00000567737 MAST2Q6P0Q8 1798 aa17.33■□□□□ 0.36
SMG1-213ENST00000567737 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
SMG1-213ENST00000567737 MAP3K10Q02779 954 aa17.32■□□□□ 0.36
SMG1-213ENST00000567737 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
SMG1-213ENST00000567737 F6X3S4 739 aa17.31■□□□□ 0.36
SMG1-213ENST00000567737 RTP1P59025 263 aa17.31■□□□□ 0.36
SMG1-213ENST00000567737 SPP2Q13103 211 aa17.31■□□□□ 0.36
SMG1-213ENST00000567737 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
SMG1-213ENST00000567737 PLXNB2O15031 1838 aa17.31■□□□□ 0.36
SMG1-213ENST00000567737 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
SMG1-213ENST00000567737 KIF16BQ96L93 1317 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 LDHBP07195 334 aaKnown RBP17.3■□□□□ 0.36
SMG1-213ENST00000567737 PRDX5P30044 214 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 RGS2P41220 211 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 HMGCS2P54868 508 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
SMG1-213ENST00000567737 ZNF280CQ8ND82 737 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 ATXN2LQ8WWM7 1075 aaKnown RBP17.3■□□□□ 0.36
SMG1-213ENST00000567737 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 PRDM5Q9NQX1 630 aaPredicted RBP17.3■□□□□ 0.36
SMG1-213ENST00000567737 ATP11BQ9Y2G3 1177 aa17.3■□□□□ 0.36
SMG1-213ENST00000567737 LTBP2Q14767 1821 aa17.29■□□□□ 0.36
SMG1-213ENST00000567737 SLURP2P0DP57 97 aa17.29■□□□□ 0.36
SMG1-213ENST00000567737 MAPK4P31152 587 aa17.29■□□□□ 0.36
SMG1-213ENST00000567737 IRX3P78415 501 aaPredicted RBP17.29■□□□□ 0.36
SMG1-213ENST00000567737 PUM3Q15397 648 aaKnown RBP17.29■□□□□ 0.36
SMG1-213ENST00000567737 SH3BP5LQ7L8J4 393 aa17.29■□□□□ 0.36
SMG1-213ENST00000567737 VGLL2Q8N8G2 317 aa17.29■□□□□ 0.36
SMG1-213ENST00000567737 GPRC5AQ8NFJ5 357 aa17.29■□□□□ 0.36
SMG1-213ENST00000567737 BADQ92934 168 aa17.29■□□□□ 0.36
SMG1-213ENST00000567737 DNAH12Q6ZR08 3092 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 DDTLA6NHG4 134 aaPredicted RBP17.28■□□□□ 0.36
SMG1-213ENST00000567737 MSCO60682 206 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 CCL14Q16627 93 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 APBA2Q99767 749 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 FARP1Q9Y4F1 1045 aaPredicted RBP17.28■□□□□ 0.36
SMG1-213ENST00000567737 CDH23Q9H251 3354 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
SMG1-213ENST00000567737 DNM1LO00429 736 aa17.27■□□□□ 0.36
SMG1-213ENST00000567737 GRIN2CQ14957 1233 aa17.27■□□□□ 0.36
SMG1-213ENST00000567737 IL27Q8NEV9 243 aa17.27■□□□□ 0.36
SMG1-213ENST00000567737 LPAR1Q92633 364 aa17.27■□□□□ 0.36
SMG1-213ENST00000567737 OSBPL5Q9H0X9 879 aaPredicted RBP17.27■□□□□ 0.36
SMG1-213ENST00000567737 ALDH1L1O75891 902 aa17.26■□□□□ 0.35
SMG1-213ENST00000567737 PICALMQ13492 652 aa17.26■□□□□ 0.35
SMG1-213ENST00000567737 MFSD14CQ5VZR4 134 aa17.26■□□□□ 0.35
SMG1-213ENST00000567737 USP6NLQ92738 828 aa17.26■□□□□ 0.35
SMG1-213ENST00000567737 RNPC3Q96LT9 517 aaKnown RBP17.26■□□□□ 0.35
SMG1-213ENST00000567737 ASB2Q96Q27 587 aa17.26■□□□□ 0.35
SMG1-213ENST00000567737 UHRF1Q96T88 793 aaPredicted RBP17.26■□□□□ 0.35
SMG1-213ENST00000567737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMG1-213ENST00000567737 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
SMG1-213ENST00000567737 THEGQ9P2T0 379 aa17.26■□□□□ 0.35
SMG1-213ENST00000567737 DDX20Q9UHI6 824 aaKnown RBP17.26■□□□□ 0.35
SMG1-213ENST00000567737 TBC1D12O60347 775 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 SLC5A1P13866 664 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 FGFR2P21802 821 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 CNGA1P29973 690 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 NUBP1P53384 320 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 SH3D19Q5HYK7 790 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 MORN1Q5T089 497 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 GPR142Q7Z601 462 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 PPM1EQ8WY54 764 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 C1QTNF1Q9BXJ1 281 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 AS3MTQ9HBK9 375 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
SMG1-213ENST00000567737 USP17L5A8MUK1 530 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 PEX10O60683 326 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 HERVK_113P62684 666 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 PLEKHH3Q7Z736 793 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 KAZALD1Q96I82 304 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 P2RX7Q99572 595 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms