RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 ERICH6BQ5W0A0 696 aa20.71■□□□□ 0.91
COMMD4-220ENST00000567720 ZKSCAN4Q969J2 545 aaPredicted RBP20.71■□□□□ 0.91
COMMD4-220ENST00000567720 STRBPQ96SI9 672 aaKnown RBP20.71■□□□□ 0.91
COMMD4-220ENST00000567720 ELP3Q9H9T3 547 aa20.71■□□□□ 0.91
COMMD4-220ENST00000567720 A0A0D9SFI3 127 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 GJA5P36382 358 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 MAP3K9P80192 1104 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 NOGQ13253 232 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 CNKSR2Q8WXI2 1034 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 CCDC102AQ96A19 550 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 FAM227BQ96M60 508 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 EPB41L4AQ9HCS5 686 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-220ENST00000567720 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-220ENST00000567720 SLC4A4Q9Y6R1 1079 aa20.7■□□□□ 0.9
COMMD4-220ENST00000567720 LOC285556D6RIA3 1793 aa20.69■□□□□ 0.9
COMMD4-220ENST00000567720 GREB1LQ9C091 1923 aaPredicted RBP20.69■□□□□ 0.9
COMMD4-220ENST00000567720 TBC1D12O60347 775 aa20.69■□□□□ 0.9
COMMD4-220ENST00000567720 HLA-DOAP06340 250 aa20.69■□□□□ 0.9
COMMD4-220ENST00000567720 MKRN3Q13064 507 aaKnown RBP20.69■□□□□ 0.9
COMMD4-220ENST00000567720 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
COMMD4-220ENST00000567720 METTL16Q86W50 562 aaKnown RBP20.69■□□□□ 0.9
COMMD4-220ENST00000567720 WNK4Q96J92 1243 aa20.69■□□□□ 0.9
COMMD4-220ENST00000567720 PI4KBQ9UBF8 816 aa20.69■□□□□ 0.9
COMMD4-220ENST00000567720 HERC5Q9UII4 1024 aaKnown RBP20.69■□□□□ 0.9
COMMD4-220ENST00000567720 CSADQ9Y600 493 aa20.69■□□□□ 0.9
COMMD4-220ENST00000567720 CYP2D6P10635 497 aa20.68■□□□□ 0.9
COMMD4-220ENST00000567720 NMIQ13287 307 aaPredicted RBP20.68■□□□□ 0.9
COMMD4-220ENST00000567720 NOL9Q5SY16 702 aaKnown RBP20.68■□□□□ 0.9
COMMD4-220ENST00000567720 SPRYD7Q5W111 196 aa20.68■□□□□ 0.9
COMMD4-220ENST00000567720 EHD4Q9H223 541 aa20.68■□□□□ 0.9
COMMD4-220ENST00000567720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.68■□□□□ 0.9
COMMD4-220ENST00000567720 ATP8A2Q9NTI2 1148 aa20.68■□□□□ 0.9
COMMD4-220ENST00000567720 MCM9Q9NXL9 1143 aa20.68■□□□□ 0.9
COMMD4-220ENST00000567720 PPP4R2Q9NY27 417 aa20.68■□□□□ 0.9
COMMD4-220ENST00000567720 SPDYE5A6NIY4 337 aa20.67■□□□□ 0.9
COMMD4-220ENST00000567720 GSG1L2A8MUP6 293 aa20.67■□□□□ 0.9
COMMD4-220ENST00000567720 SDSP20132 328 aa20.67■□□□□ 0.9
COMMD4-220ENST00000567720 PLCD1P51178 756 aa20.67■□□□□ 0.9
COMMD4-220ENST00000567720 RRP1BQ14684 758 aaKnown RBP20.67■□□□□ 0.9
COMMD4-220ENST00000567720 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
COMMD4-220ENST00000567720 OPTNQ96CV9 577 aa20.67■□□□□ 0.9
COMMD4-220ENST00000567720 SLC10A4Q96EP9 437 aa20.67■□□□□ 0.9
COMMD4-220ENST00000567720 SMIM22K7EJ46 135 aa20.66■□□□□ 0.9
COMMD4-220ENST00000567720 FOXP2O15409 715 aa20.66■□□□□ 0.9
COMMD4-220ENST00000567720 ZBTB48P10074 688 aaPredicted RBP20.66■□□□□ 0.9
COMMD4-220ENST00000567720 MAP2K2P36507 400 aa20.66■□□□□ 0.9
COMMD4-220ENST00000567720 ZNF589Q86UQ0 364 aaPredicted RBP20.66■□□□□ 0.9
COMMD4-220ENST00000567720 CRACR2BQ8N4Y2 399 aaPredicted RBP20.66■□□□□ 0.9
COMMD4-220ENST00000567720 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.66■□□□□ 0.9
COMMD4-220ENST00000567720 CYP2D7A0A087X1C5 515 aa20.65■□□□□ 0.9
COMMD4-220ENST00000567720 POLR3DP05423 398 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-220ENST00000567720 KIF23Q02241 960 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-220ENST00000567720 TTC6Q86TZ1 520 aa20.65■□□□□ 0.9
COMMD4-220ENST00000567720 SCYL3Q8IZE3 742 aa20.65■□□□□ 0.9
COMMD4-220ENST00000567720 OTUD5Q96G74 571 aa20.65■□□□□ 0.9
COMMD4-220ENST00000567720 HELLSQ9NRZ9 838 aa20.65■□□□□ 0.9
COMMD4-220ENST00000567720 SERPINB13Q9UIV8 391 aa20.65■□□□□ 0.9
COMMD4-220ENST00000567720 ROBO3Q96MS0 1386 aa20.64■□□□□ 0.89
COMMD4-220ENST00000567720 GNAT2P19087 354 aa20.64■□□□□ 0.89
COMMD4-220ENST00000567720 GABPAQ06546 454 aa20.64■□□□□ 0.89
COMMD4-220ENST00000567720 SHROOM1Q2M3G4 852 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-220ENST00000567720 ARPP21Q9UBL0 812 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-220ENST00000567720 CCDC171Q6TFL3 1326 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 USP17L12C9JPN9 530 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 USP17L21D6R901 530 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 CTNND1O60716 968 aaKnown RBP20.63■□□□□ 0.89
COMMD4-220ENST00000567720 SHMT1P34896 483 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 VPS53Q5VIR6 699 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 GIMAP6Q6P9H5 292 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 ERO1BQ86YB8 467 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 FOXP4Q8IVH2 680 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-220ENST00000567720 TRIM34Q9BYJ4 488 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 DIAPH3Q9NSV4 1193 aa20.63■□□□□ 0.89
COMMD4-220ENST00000567720 GDF11O95390 407 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 CAP2P40123 477 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 JAG1P78504 1218 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 PPIL2Q13356 520 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 C12orf60Q5U649 245 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 CTR9Q6PD62 1173 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 CCDC84Q86UT8 332 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-220ENST00000567720 SLC44A5Q8NCS7 719 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 DDRGK1Q96HY6 314 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 IL25Q9H293 177 aa20.62■□□□□ 0.89
COMMD4-220ENST00000567720 HSPA1AP0DMV8 641 aaKnown RBP20.61■□□□□ 0.89
COMMD4-220ENST00000567720 HSPA1BP0DMV9 641 aaKnown RBP20.61■□□□□ 0.89
COMMD4-220ENST00000567720 TDO2P48775 406 aa20.61■□□□□ 0.89
COMMD4-220ENST00000567720 TATDN1Q6P1N9 297 aa20.61■□□□□ 0.89
COMMD4-220ENST00000567720 CWC27Q6UX04 472 aaKnown RBP20.61■□□□□ 0.89
COMMD4-220ENST00000567720 IFNL3Q8IZI9 196 aa20.61■□□□□ 0.89
COMMD4-220ENST00000567720 DYNLL2Q96FJ2 89 aa20.61■□□□□ 0.89
COMMD4-220ENST00000567720 WBP1LQ9NX94 342 aa20.61■□□□□ 0.89
COMMD4-220ENST00000567720 PATL2C9JE40 543 aaKnown RBP20.6■□□□□ 0.89
COMMD4-220ENST00000567720 HIP1O00291 1037 aa20.6■□□□□ 0.89
COMMD4-220ENST00000567720 IRF6O14896 467 aa20.6■□□□□ 0.89
COMMD4-220ENST00000567720 PTPRAP18433 802 aa20.6■□□□□ 0.89
COMMD4-220ENST00000567720 PPATQ06203 517 aa20.6■□□□□ 0.89
COMMD4-220ENST00000567720 SBK1Q52WX2 424 aa20.6■□□□□ 0.89
COMMD4-220ENST00000567720 PICK1Q9NRD5 415 aa20.6■□□□□ 0.89
COMMD4-220ENST00000567720 MYH4Q9Y623 1939 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms