RNA–Protein interactions for RNA: ENST00000566829.1

BBS4-211, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-211ENST00000566829 JAKMIP1Q96N16 626 aaKnown RBP10.4□□□□□ -0.74
BBS4-211ENST00000566829 DHX36Q9H2U1 1008 aaKnown RBP10.4□□□□□ -0.74
BBS4-211ENST00000566829 INCENPQ9NQS7 918 aa10.4□□□□□ -0.74
BBS4-211ENST00000566829 GGA3Q9NZ52 723 aa10.4□□□□□ -0.74
BBS4-211ENST00000566829 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.74
BBS4-211ENST00000566829 PITPNM2Q9BZ72 1349 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 SLC3A2P08195 630 aaKnown RBP10.39□□□□□ -0.75
BBS4-211ENST00000566829 FGRP09769 529 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 TNNI2P48788 182 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 TNFAIP1Q13829 316 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 RASA3Q14644 834 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 MFSD6Q6ZSS7 791 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 TTC6Q86TZ1 520 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 APOBEC3FQ8IUX4 373 aaKnown RBP10.39□□□□□ -0.75
BBS4-211ENST00000566829 CDAN1Q8IWY9 1227 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 NEK1Q96PY6 1258 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 TM6SF1Q9BZW5 370 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 TMEM39BQ9GZU3 492 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 EHD4Q9H223 541 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 RNF41Q9H4P4 317 aaPredicted RBP10.39□□□□□ -0.75
BBS4-211ENST00000566829 PGAP2Q9UHJ9 254 aa10.39□□□□□ -0.75
BBS4-211ENST00000566829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.39□□□□□ -0.75
BBS4-211ENST00000566829 PRDM1O75626 825 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 CPA1P15085 419 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 CASTP20810 708 aaKnown RBP10.38□□□□□ -0.75
BBS4-211ENST00000566829 PSMA5P28066 241 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 GABPAQ06546 454 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 RABEP1Q15276 862 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 C16orf86Q6ZW13 317 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 ZSCAN29Q8IWY8 852 aaPredicted RBP10.38□□□□□ -0.75
BBS4-211ENST00000566829 MB21D2Q8IYB1 491 aaPredicted RBP10.38□□□□□ -0.75
BBS4-211ENST00000566829 SLC44A5Q8NCS7 719 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 TEPSINQ96N21 525 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 CSRNP1Q96S65 589 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 UPF3BQ9BZI7 483 aaKnown RBP10.38□□□□□ -0.75
BBS4-211ENST00000566829 DEFB129Q9H1M3 183 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 RRAGCQ9HB90 399 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 PI4KBQ9UBF8 816 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 SERPINB13Q9UIV8 391 aa10.38□□□□□ -0.75
BBS4-211ENST00000566829 B4E1Z4 1266 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 ORC4O43929 436 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 SLURP2P0DP57 97 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 PCP11498 1178 aaKnown RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 CDK8P49336 464 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 PDE4BQ07343 736 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 EAPPQ56P03 285 aaPredicted RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 RRP12Q5JTH9 1297 aaKnown RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 RUFY3Q7L099 469 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 PNMA8AQ86V59 439 aaPredicted RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 METTL16Q86W50 562 aaKnown RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 DCPSQ96C86 337 aaKnown RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 KRT23Q9C075 422 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 DNAJC18Q9H819 358 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 CNNM2Q9H8M5 875 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 NMRK2Q9NPI5 230 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 TOMM22Q9NS69 142 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
BBS4-211ENST00000566829 CYP46A1Q9Y6A2 500 aa10.37□□□□□ -0.75
BBS4-211ENST00000566829 FAM196BA6NMK8 535 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 ADM5C9JUS6 153 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 KDM4AO75164 1064 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 HMGB1P09429 215 aaKnown RBP10.36□□□□□ -0.75
BBS4-211ENST00000566829 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 RASA1P20936 1047 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 RPS6KB1P23443 525 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 SHMT1P34896 483 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 ANTXR2P58335 489 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 TRDNQ13061 729 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 BLOC1S2Q6QNY1 142 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 CYB5R4Q7L1T6 521 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 FOXP4Q8IVH2 680 aaPredicted RBP10.36□□□□□ -0.75
BBS4-211ENST00000566829 CRACR2BQ8N4Y2 399 aaPredicted RBP10.36□□□□□ -0.75
BBS4-211ENST00000566829 TCEANC2Q96MN5 208 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 MKNK2Q9HBH9 465 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 SWAP70Q9UH65 585 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 PPP2R3BQ9Y5P8 575 aa10.36□□□□□ -0.75
BBS4-211ENST00000566829 GREB1LQ9C091 1923 aaPredicted RBP10.36□□□□□ -0.75
BBS4-211ENST00000566829 SSC5DA1L4H1 1573 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 PRC1O43663 620 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 RANBP6O60518 1105 aaKnown RBP10.35□□□□□ -0.75
BBS4-211ENST00000566829 MCM5P33992 734 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 NEK4P51957 841 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 EXOSC10Q01780 885 aaKnown RBP10.35□□□□□ -0.75
BBS4-211ENST00000566829 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 NBPF12Q5TAG4 269 aaPredicted RBP10.35□□□□□ -0.75
BBS4-211ENST00000566829 PRAMEF18Q5VWM3 479 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 TATDN1Q6P1N9 297 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
BBS4-211ENST00000566829 CHST3Q7LGC8 479 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 SULF1Q8IWU6 871 aa10.35□□□□□ -0.75
BBS4-211ENST00000566829 ESR2Q92731 530 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms