RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 SIPA1L1O43166 1804 aa16.5■□□□□ 0.23
SPG7-215ENST00000566682 MBD4O95243 580 aa16.5■□□□□ 0.23
SPG7-215ENST00000566682 KIF23Q02241 960 aaPredicted RBP16.5■□□□□ 0.23
SPG7-215ENST00000566682 VGLL4Q14135 290 aa16.5■□□□□ 0.23
SPG7-215ENST00000566682 LRRFIP1Q32MZ4 808 aaKnown RBP16.5■□□□□ 0.23
SPG7-215ENST00000566682 APPBP2Q92624 585 aa16.5■□□□□ 0.23
SPG7-215ENST00000566682 ZKSCAN4Q969J2 545 aaPredicted RBP16.5■□□□□ 0.23
SPG7-215ENST00000566682 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
SPG7-215ENST00000566682 SAP30BPQ9UHR5 308 aaKnown RBP16.5■□□□□ 0.23
SPG7-215ENST00000566682 CSADQ9Y600 493 aa16.5■□□□□ 0.23
SPG7-215ENST00000566682 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 TBC1D12O60347 775 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 INPP5BP32019 993 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 MKRN3Q13064 507 aaKnown RBP16.49■□□□□ 0.23
SPG7-215ENST00000566682 SPRYD7Q5W111 196 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 OSBP2Q969R2 916 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
SPG7-215ENST00000566682 PI4KBQ9UBF8 816 aa16.49■□□□□ 0.23
SPG7-215ENST00000566682 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
SPG7-215ENST00000566682 PHF20L1A8MW92 1017 aa16.48■□□□□ 0.23
SPG7-215ENST00000566682 PRKAB2O43741 272 aa16.48■□□□□ 0.23
SPG7-215ENST00000566682 MAP2K1Q02750 393 aaPredicted RBP16.48■□□□□ 0.23
SPG7-215ENST00000566682 SLC4A8Q2Y0W8 1093 aa16.48■□□□□ 0.23
SPG7-215ENST00000566682 FOXP4Q8IVH2 680 aaPredicted RBP16.48■□□□□ 0.23
SPG7-215ENST00000566682 WNK4Q96J92 1243 aa16.48■□□□□ 0.23
SPG7-215ENST00000566682 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
SPG7-215ENST00000566682 BAZ2AQ9UIF9 1905 aaKnown RBP16.48■□□□□ 0.23
SPG7-215ENST00000566682 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
SPG7-215ENST00000566682 ZBTB48P10074 688 aaPredicted RBP16.47■□□□□ 0.23
SPG7-215ENST00000566682 GJA5P36382 358 aa16.47■□□□□ 0.23
SPG7-215ENST00000566682 CENPQQ7L2Z9 268 aaPredicted RBP16.47■□□□□ 0.23
SPG7-215ENST00000566682 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
SPG7-215ENST00000566682 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
SPG7-215ENST00000566682 STRBPQ96SI9 672 aaKnown RBP16.47■□□□□ 0.23
SPG7-215ENST00000566682 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
SPG7-215ENST00000566682 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
SPG7-215ENST00000566682 WBP1LQ9NX94 342 aa16.47■□□□□ 0.23
SPG7-215ENST00000566682 HERC5Q9UII4 1024 aaKnown RBP16.47■□□□□ 0.23
SPG7-215ENST00000566682 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
SPG7-215ENST00000566682 DDX60LQ5H9U9 1706 aaKnown RBP16.47■□□□□ 0.23
SPG7-215ENST00000566682 M0R2C6 588 aa16.46■□□□□ 0.23
SPG7-215ENST00000566682 HSPA1AP0DMV8 641 aaKnown RBP16.46■□□□□ 0.23
SPG7-215ENST00000566682 HSPA1BP0DMV9 641 aaKnown RBP16.46■□□□□ 0.23
SPG7-215ENST00000566682 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.23
SPG7-215ENST00000566682 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
SPG7-215ENST00000566682 METTL16Q86W50 562 aaKnown RBP16.46■□□□□ 0.23
SPG7-215ENST00000566682 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
SPG7-215ENST00000566682 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.23
SPG7-215ENST00000566682 MCM9Q9NXL9 1143 aa16.46■□□□□ 0.23
SPG7-215ENST00000566682 LAMB1P07942 1786 aa16.46■□□□□ 0.22
SPG7-215ENST00000566682 SPDYE5A6NIY4 337 aa16.45■□□□□ 0.22
SPG7-215ENST00000566682 GPAA1O43292 621 aa16.45■□□□□ 0.22
SPG7-215ENST00000566682 CTNND1O60716 968 aaKnown RBP16.45■□□□□ 0.22
SPG7-215ENST00000566682 POLR3DP05423 398 aaPredicted RBP16.45■□□□□ 0.22
SPG7-215ENST00000566682 PLCD1P51178 756 aa16.45■□□□□ 0.22
SPG7-215ENST00000566682 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
SPG7-215ENST00000566682 ERO1BQ86YB8 467 aa16.45■□□□□ 0.22
SPG7-215ENST00000566682 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
SPG7-215ENST00000566682 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
SPG7-215ENST00000566682 DOCK1Q14185 1865 aa16.45■□□□□ 0.22
SPG7-215ENST00000566682 ATAD5Q96QE3 1844 aa16.45■□□□□ 0.22
SPG7-215ENST00000566682 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
SPG7-215ENST00000566682 SCYL3Q8IZE3 742 aa16.44■□□□□ 0.22
SPG7-215ENST00000566682 OTUD5Q96G74 571 aa16.44■□□□□ 0.22
SPG7-215ENST00000566682 BEGAINQ9BUH8 593 aa16.44■□□□□ 0.22
SPG7-215ENST00000566682 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
SPG7-215ENST00000566682 PCNTO95613 3336 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 MANSC4A6NHS7 340 aaPredicted RBP16.43■□□□□ 0.22
SPG7-215ENST00000566682 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 CAP2P40123 477 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 TM4SF4P48230 202 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 PPATQ06203 517 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 RRP1BQ14684 758 aaKnown RBP16.43■□□□□ 0.22
SPG7-215ENST00000566682 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 DDRGK1Q96HY6 314 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 EHD4Q9H223 541 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 SERPINB13Q9UIV8 391 aa16.43■□□□□ 0.22
SPG7-215ENST00000566682 USP17L12C9JPN9 530 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 USP17L21D6R901 530 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 IRF6O14896 467 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 CYP2D6P10635 497 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
SPG7-215ENST00000566682 GNAT2P19087 354 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 SDSP20132 328 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 INHBEP58166 350 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 SREBF2Q12772 1141 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 MS4A4AQ96JQ5 239 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 FAM227BQ96M60 508 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 PICK1Q9NRD5 415 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 HELLSQ9NRZ9 838 aa16.42■□□□□ 0.22
SPG7-215ENST00000566682 PHIPQ8WWQ0 1821 aa16.41■□□□□ 0.22
SPG7-215ENST00000566682 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
SPG7-215ENST00000566682 FOXN1O15353 648 aa16.41■□□□□ 0.22
SPG7-215ENST00000566682 PTPRAP18433 802 aa16.41■□□□□ 0.22
SPG7-215ENST00000566682 GABPAQ06546 454 aa16.41■□□□□ 0.22
SPG7-215ENST00000566682 PPIL2Q13356 520 aa16.41■□□□□ 0.22
SPG7-215ENST00000566682 ERICH6BQ5W0A0 696 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms