RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 LRRC24Q50LG9 513 aa8.74□□□□□ -1.01
SIN3A-207ENST00000566640 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.74□□□□□ -1.01
SIN3A-207ENST00000566640 OTOP1Q7RTM1 612 aa8.74□□□□□ -1.01
SIN3A-207ENST00000566640 API5Q9BZZ5 524 aaKnown RBP8.74□□□□□ -1.01
SIN3A-207ENST00000566640 PDE8BO95263 885 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 UBTFL1P0CB47 393 aaPredicted RBP8.73□□□□□ -1.01
SIN3A-207ENST00000566640 TRIM27P14373 513 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 FGFR2P21802 821 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
SIN3A-207ENST00000566640 CRHR2Q13324 411 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.73□□□□□ -1.01
SIN3A-207ENST00000566640 OPTNQ96CV9 577 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 ZFRQ96KR1 1074 aaKnown RBP8.73□□□□□ -1.01
SIN3A-207ENST00000566640 MEIS3Q99687 375 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 TMEM39BQ9GZU3 492 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 USP44Q9H0E7 712 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
SIN3A-207ENST00000566640 TRIM17Q9Y577 477 aa8.73□□□□□ -1.01
SIN3A-207ENST00000566640 LRRFIP2Q9Y608 721 aaKnown RBP8.73□□□□□ -1.01
SIN3A-207ENST00000566640 GOLGA8CPA6NN73 597 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 TCP10L2B9ZVM9 353 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 RFX5P48382 616 aaPredicted RBP8.72□□□□□ -1.01
SIN3A-207ENST00000566640 VGLL4Q14135 290 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 APOBEC3HQ6NTF7 200 aaKnown RBP8.72□□□□□ -1.01
SIN3A-207ENST00000566640 FTSJ3Q8IY81 847 aaKnown RBP8.72□□□□□ -1.01
SIN3A-207ENST00000566640 IL27Q8NEV9 243 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 TBC1D22AQ8WUA7 517 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 BRI3BPQ8WY22 251 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 ERO1AQ96HE7 468 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 YTHDC1Q96MU7 727 aaKnown RBP8.72□□□□□ -1.01
SIN3A-207ENST00000566640 ZDHHC15Q96MV8 337 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 MRIQ9BWK5 157 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 SIL1Q9H173 461 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 ELP3Q9H9T3 547 aa8.72□□□□□ -1.01
SIN3A-207ENST00000566640 IQSEC3Q9UPP2 1182 aaPredicted RBP8.72□□□□□ -1.01
SIN3A-207ENST00000566640 SPDYE5A6NIY4 337 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 TNNI2P48788 182 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 BCAMP50895 628 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 SP3Q02447 781 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 CHAF1AQ13111 956 aaPredicted RBP8.71□□□□□ -1.02
SIN3A-207ENST00000566640 CAVIN4Q5BKX8 364 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 SWT1Q5T5J6 900 aaKnown RBP8.71□□□□□ -1.02
SIN3A-207ENST00000566640 FKBP1CQ5VVH2 108 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 INTS3Q68E01 1043 aaKnown RBP8.71□□□□□ -1.02
SIN3A-207ENST00000566640 OTUD7BQ6GQQ9 843 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 ATF7IPQ6VMQ6 1270 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 FAM83AQ86UY5 434 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 VPS37DQ86XT2 251 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 CD99L2Q8TCZ2 262 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 TEKT1Q969V4 418 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 ARMC5Q96C12 935 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.02
SIN3A-207ENST00000566640 PTPN22Q9Y2R2 807 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 SUGT1Q9Y2Z0 365 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 AKAP11Q9UKA4 1901 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 RPAP1Q9BWH6 1393 aaPredicted RBP8.71□□□□□ -1.02
SIN3A-207ENST00000566640 LAMB1P07942 1786 aa8.71□□□□□ -1.02
SIN3A-207ENST00000566640 GTF2A2P52657 109 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 CACNB3P54284 484 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 PUM3Q15397 648 aaKnown RBP8.7□□□□□ -1.02
SIN3A-207ENST00000566640 ZKSCAN2Q63HK3 967 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 ATG9AQ7Z3C6 839 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 ITPRIPQ8IWB1 547 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 FAM43AQ8N2R8 423 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 TMEM57Q8N5G2 664 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 ANKK1Q8NFD2 765 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 PA2G4Q9UQ80 394 aaKnown RBP8.7□□□□□ -1.02
SIN3A-207ENST00000566640 ECM29Q5VYK3 1845 aa8.7□□□□□ -1.02
SIN3A-207ENST00000566640 CCL15-CCL14A0A0B4J2E2 113 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 EYA2O00167 538 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 IPO8O15397 1037 aaKnown RBP8.69□□□□□ -1.02
SIN3A-207ENST00000566640 RNF40O75150 1001 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 IFIT1P09914 478 aaKnown RBP8.69□□□□□ -1.02
SIN3A-207ENST00000566640 CCL15Q16663 113 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 HHIPL2Q6UWX4 724 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 Q6ZNB5 142 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 LRCH3Q96II8 777 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 C1orf115Q9H7X2 142 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 ZCCHC17Q9NP64 241 aaKnown RBP8.69□□□□□ -1.02
SIN3A-207ENST00000566640 CSADQ9Y600 493 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 MAST3O60307 1309 aa8.69□□□□□ -1.02
SIN3A-207ENST00000566640 BTBD19C9JJ37 291 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 FRAT2O75474 233 aaPredicted RBP8.68□□□□□ -1.02
SIN3A-207ENST00000566640 RLBP1P12271 317 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 TAF1CQ15572 869 aaPredicted RBP8.68□□□□□ -1.02
SIN3A-207ENST00000566640 ERO1BQ86YB8 467 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 WDR66Q8TBY9 1149 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 LPIN2Q92539 896 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 ARHGAP45Q92619 1136 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 WNT2BQ93097 391 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 ZKSCAN4Q969J2 545 aaPredicted RBP8.68□□□□□ -1.02
SIN3A-207ENST00000566640 ZNF333Q96JL9 665 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 WRNIP1Q96S55 665 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 ZFYVE28Q9HCC9 887 aa8.68□□□□□ -1.02
SIN3A-207ENST00000566640 DDX11L8A8MPP1 907 aa8.67□□□□□ -1.02
SIN3A-207ENST00000566640 SRGAP3O43295 1099 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms