RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CCDC93Q567U6 631 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 ZNF446Q9NWS9 450 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 SERTAD1Q9UHV2 236 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 TOB1P50616 345 aaPredicted RBP16.33■□□□□ 0.2
CDH1-209ENST00000566510 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
CDH1-209ENST00000566510 RASGRF1Q13972 1273 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 WTAPQ15007 396 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 MIGA1Q8NAN2 632 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 NFE2L3Q9Y4A8 694 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 ATRNO75882 1429 aa16.33■□□□□ 0.2
CDH1-209ENST00000566510 ZSCAN12O43309 604 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 MPHOSPH8Q99549 860 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 KRT23Q9C075 422 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 CNNM2Q9H8M5 875 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 ST7Q9NRC1 585 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 PAPPAQ13219 1627 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 FAM237AA0A1B0GTK4 181 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 TUBB4AP04350 444 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 SLC5A1P13866 664 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 IFNAR1P17181 557 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 BAG1Q99933 345 aaPredicted RBP16.32■□□□□ 0.2
CDH1-209ENST00000566510 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 ECM29Q5VYK3 1845 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 TRIM65Q6PJ69 517 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 CARD6Q9BX69 1037 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 NACAP1Q9BZK3 213 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 INTS13Q9NVM9 706 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 PPP2R2CQ9Y2T4 447 aa16.32■□□□□ 0.2
CDH1-209ENST00000566510 PHLPP2Q6ZVD8 1323 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 MYH3P11055 1940 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 CLCN6P51797 869 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 FMR1Q06787 632 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDH1-209ENST00000566510 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
CDH1-209ENST00000566510 REXO1L1PQ8IX06 675 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 LCORLQ8N3X6 602 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 CABP5Q9NP86 173 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 ARHGAP6O43182 974 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 SLFN14P0C7P3 912 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 MDM2Q00987 491 aaPredicted RBP16.31■□□□□ 0.2
CDH1-209ENST00000566510 LRP2BPQ9P2M1 347 aa16.31■□□□□ 0.2
CDH1-209ENST00000566510 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
CDH1-209ENST00000566510 CHD4Q14839 1912 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 GNG11P61952 73 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
CDH1-209ENST00000566510 ALX1Q15699 326 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 RILPL1Q5EBL4 403 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
CDH1-209ENST00000566510 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 STK36Q9NRP7 1315 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 CYP19A1P11511 503 aaPredicted RBP16.3■□□□□ 0.2
CDH1-209ENST00000566510 H2AFXP16104 143 aaPredicted RBP16.3■□□□□ 0.2
CDH1-209ENST00000566510 BCAMP50895 628 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 HSPA2P54652 639 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 TERF2Q15554 542 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 USP49Q70CQ1 688 aa16.3■□□□□ 0.2
CDH1-209ENST00000566510 FANCGO15287 622 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 PTPREP23469 700 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 SPECC1LQ69YQ0 1117 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 KLHL10Q6JEL2 608 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 SEC31BQ9NQW1 1179 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 SAMSN1Q9NSI8 373 aaKnown RBP16.29■□□□□ 0.2
CDH1-209ENST00000566510 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 hCG_1642624A0A1W2PR95 340 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 DEXIO95424 95 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 CASQ1P31415 396 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
CDH1-209ENST00000566510 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
CDH1-209ENST00000566510 FOXP1Q9H334 677 aaPredicted RBP16.29■□□□□ 0.2
CDH1-209ENST00000566510 ARGLU1Q9NWB6 273 aaPredicted RBP16.29■□□□□ 0.2
CDH1-209ENST00000566510 VWA3AA6NCI4 1184 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 MYO1BO43795 1136 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 AFMP43652 599 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 AKAP17AQ02040 695 aaKnown RBP16.28■□□□□ 0.2
CDH1-209ENST00000566510 TOGARAM2Q6ZUX3 1019 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 MLKLQ8NB16 471 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 DESI2Q9BSY9 194 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 EPC1Q9H2F5 836 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 FGFR2P21802 821 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 TMCO3Q6UWJ1 677 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 TMEM139Q8IV31 216 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 DHX58Q96C10 678 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 ABCF2Q9UG63 623 aa16.28■□□□□ 0.2
CDH1-209ENST00000566510 PARP3Q9Y6F1 533 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms