RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 NLRP12P59046 1061 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 KIF4BQ2VIQ3 1234 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 CYFIP1Q7L576 1253 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 SH3TC2Q8TF17 1288 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 BTBD6Q96KE9 485 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 USP26Q9BXU7 913 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 PRDM6Q9NQX0 595 aa7.31□□□□□ -1.24
CNOT1-209ENST00000566240 LOC100289279A0A1B0GTE1 492 aa7.3□□□□□ -1.24
CNOT1-209ENST00000566240 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
CNOT1-209ENST00000566240 PDE4BQ07343 736 aa7.3□□□□□ -1.24
CNOT1-209ENST00000566240 ZC3H12AQ5D1E8 599 aaKnown RBP7.3□□□□□ -1.24
CNOT1-209ENST00000566240 HP1BP3Q5SSJ5 553 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-209ENST00000566240 C12orf40Q86WS4 652 aa7.3□□□□□ -1.24
CNOT1-209ENST00000566240 MAP4K3Q8IVH8 894 aa7.3□□□□□ -1.24
CNOT1-209ENST00000566240 DMRTC2Q8IXT2 367 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-209ENST00000566240 TAB3Q8N5C8 712 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-209ENST00000566240 KANSL2Q9H9L4 492 aa7.3□□□□□ -1.24
CNOT1-209ENST00000566240 GMIPQ9P107 970 aa7.3□□□□□ -1.24
CNOT1-209ENST00000566240 DDX3YO15523 660 aaKnown RBP7.29□□□□□ -1.24
CNOT1-209ENST00000566240 OIP5O43482 229 aa7.29□□□□□ -1.24
CNOT1-209ENST00000566240 SLFN14P0C7P3 912 aa7.29□□□□□ -1.24
CNOT1-209ENST00000566240 INTS3Q68E01 1043 aaKnown RBP7.29□□□□□ -1.24
CNOT1-209ENST00000566240 OVOS1Q6IE37 1185 aa7.29□□□□□ -1.24
CNOT1-209ENST00000566240 C6orf15Q6UXA7 325 aaPredicted RBP7.29□□□□□ -1.24
CNOT1-209ENST00000566240 ILDR2Q71H61 639 aa7.29□□□□□ -1.24
CNOT1-209ENST00000566240 FAM178BQ8IXR5 827 aa7.29□□□□□ -1.24
CNOT1-209ENST00000566240 ATG4CQ96DT6 458 aa7.29□□□□□ -1.24
CNOT1-209ENST00000566240 CSADQ9Y600 493 aa7.29□□□□□ -1.24
CNOT1-209ENST00000566240 PRAMEF27A3QJZ7 478 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 AOC2O75106 756 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 DLGAP3O95886 979 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 ITGB2P05107 769 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 NME1P15531 152 aaKnown RBP7.28□□□□□ -1.24
CNOT1-209ENST00000566240 GRK4P32298 578 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 CD68P34810 354 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-209ENST00000566240 PLA2G4EQ3MJ16 856 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 MTERF2Q49AM1 385 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 PLEKHG4Q58EX7 1191 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 TMEM201Q5SNT2 666 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 UNC5AQ6ZN44 842 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 NLRC3Q7RTR2 1065 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 WDR18Q9BV38 432 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 FANCLQ9NW38 375 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 ADAM30Q9UKF2 790 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 SLC12A7Q9Y666 1083 aa7.28□□□□□ -1.24
CNOT1-209ENST00000566240 CNTNAP5Q8WYK1 1306 aa7.27□□□□□ -1.24
CNOT1-209ENST00000566240 B2RBV5 119 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 SHISA8B8ZZ34 492 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 DNAJA2O60884 412 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 ADAM11O75078 769 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 CDC45O75419 566 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 PGRP06401 933 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 ACRP10323 421 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 NID1P14543 1247 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 RING1Q06587 406 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 COL9A3Q14050 684 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-209ENST00000566240 ZYXQ15942 572 aaKnown RBP7.27□□□□□ -1.25
CNOT1-209ENST00000566240 CDCP2Q5VXM1 449 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 APPBP2Q92624 585 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 DCAF5Q96JK2 942 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 CNNM2Q9H8M5 875 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 ENAMQ9NRM1 1142 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 RAD18Q9NS91 495 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 LRRC4BQ9NT99 713 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 KCNK4Q9NYG8 393 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 HIF3AQ9Y2N7 669 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 PCDHGC5Q9Y5F6 944 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 SYNGAP1Q96PV0 1343 aa7.27□□□□□ -1.25
CNOT1-209ENST00000566240 ESYT3A0FGR9 886 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 TNFRSF10CO14798 259 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 DEAF1O75398 565 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-209ENST00000566240 BCRP11274 1271 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 AMPD1P23109 780 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 ETF1P62495 437 aaKnown RBP7.26□□□□□ -1.25
CNOT1-209ENST00000566240 FOXD4L6Q3SYB3 417 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-209ENST00000566240 ARSHQ5FYA8 562 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 EXOSC6Q5RKV6 272 aaKnown RBP7.26□□□□□ -1.25
CNOT1-209ENST00000566240 RNF187Q5TA31 235 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-209ENST00000566240 FOXD4L3Q6VB84 417 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-209ENST00000566240 HOMER1Q86YM7 354 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 ST13P5Q8NFI4 369 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-209ENST00000566240 SLC9A7Q96T83 725 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 WNT10AQ9GZT5 417 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 KLHL3Q9UH77 587 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 LTBP3Q9NS15 1303 aa7.26□□□□□ -1.25
CNOT1-209ENST00000566240 UPK3BL1B0FP48 263 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 CHURC1-FNTBB4DL54 471 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 UPK3BL2E5RIL1 263 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 MSTNO14793 375 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 ERVK-24P63145 666 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 NCAPHQ15003 741 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 PTPROQ16827 1216 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 PPM1JQ5JR12 505 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 MRM1Q6IN84 353 aaKnown RBP7.25□□□□□ -1.25
CNOT1-209ENST00000566240 VHLLQ6RSH7 139 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 SPATC1Q76KD6 591 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 DTWD1Q8N5C7 304 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 DCAF11Q8TEB1 546 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms