RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PIH1D3Q9NQM4 214 aaKnown RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 TLR7Q9NYK1 1049 aaKnown RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 SAP30BPQ9UHR5 308 aaKnown RBP7.83□□□□□ -1.16
TCF4-228ENST00000565393 PALD1Q9ULE6 856 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 COG6Q9Y2V7 657 aa7.83□□□□□ -1.16
TCF4-228ENST00000565393 A0A0G2JLL6 359 aaPredicted RBP7.82□□□□□ -1.16
TCF4-228ENST00000565393 HMMRO75330 724 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 HLA-DOAP06340 250 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 IFIT2P09913 472 aaKnown RBP7.82□□□□□ -1.16
TCF4-228ENST00000565393 OSBPP22059 807 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 USP5P45974 858 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 MAP3K12Q12852 859 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 PRRT2Q7Z6L0 340 aaPredicted RBP7.82□□□□□ -1.16
TCF4-228ENST00000565393 CLASRPQ8N2M8 674 aaKnown RBP7.82□□□□□ -1.16
TCF4-228ENST00000565393 MAGEB6Q8N7X4 407 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 MIGA1Q8NAN2 632 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 ZNF280CQ8ND82 737 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 RHPN1Q8TCX5 695 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 ZNF333Q96JL9 665 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 AS3MTQ9HBK9 375 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 SRRDQ9UH36 339 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 HERC5Q9UII4 1024 aaKnown RBP7.82□□□□□ -1.16
TCF4-228ENST00000565393 DBNLQ9UJU6 430 aaKnown RBP7.82□□□□□ -1.16
TCF4-228ENST00000565393 RCAN3Q9UKA8 241 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 TAOK2Q9UL54 1235 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 NDUFB9Q9Y6M9 179 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 AKAP11Q9UKA4 1901 aa7.82□□□□□ -1.16
TCF4-228ENST00000565393 IGSF3O75054 1194 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 CTGFP29279 349 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 GRK4P32298 578 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 PABPC4Q13310 644 aaKnown RBP eCLIP7.81□□□□□ -1.16
TCF4-228ENST00000565393 RRP1BQ14684 758 aaKnown RBP7.81□□□□□ -1.16
TCF4-228ENST00000565393 PRPF38BQ5VTL8 546 aaKnown RBP7.81□□□□□ -1.16
TCF4-228ENST00000565393 ADGRA1Q86SQ6 560 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 ANKRD13CQ8N6S4 541 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 ANTXR1Q9H6X2 564 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 TMOD4Q9NZQ9 345 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 DDX19BQ9UMR2 479 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 AGTPBP1Q9UPW5 1226 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 SLC45A1Q9Y2W3 748 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 ATRNL1Q5VV63 1379 aa7.81□□□□□ -1.16
TCF4-228ENST00000565393 MYPNQ86TC9 1320 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 A0A1B0GUL6 1792 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 TNPO2O14787 897 aaKnown RBP7.8□□□□□ -1.16
TCF4-228ENST00000565393 RAB11FIP3O75154 756 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 POLR3DP05423 398 aaPredicted RBP7.8□□□□□ -1.16
TCF4-228ENST00000565393 BCRP11274 1271 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 HMGCS2P54868 508 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 UBXN2AP68543 259 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 PRKCZQ05513 592 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 TTF1Q15361 905 aaPredicted RBP7.8□□□□□ -1.16
TCF4-228ENST00000565393 TREML2Q5T2D2 321 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 SLC9C2Q5TAH2 1124 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 TTC6Q86TZ1 520 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 PROCA1Q8NCQ7 364 aaPredicted RBP7.8□□□□□ -1.16
TCF4-228ENST00000565393 COA7Q96BR5 231 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 KIF1BPQ96EK5 621 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 DNAJC2Q99543 621 aaKnown RBP7.8□□□□□ -1.16
TCF4-228ENST00000565393 TBC1D2Q9BYX2 928 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 RNF208Q9H0X6 261 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 PNMA3Q9UL41 463 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 GABRQQ9UN88 632 aa7.8□□□□□ -1.16
TCF4-228ENST00000565393 FLT1P17948 1338 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 MAGEB6P1A0A0J9YX57 407 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 C19orf81C9J6K1 198 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 GOLIM4O00461 696 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 ADCY3O60266 1144 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 GDF11O95390 407 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 ASNSP08243 561 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 CCL5P13501 91 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 FLT3LGP49771 235 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 MTMR2Q13614 643 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 MTFR1Q15390 333 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 CERS3Q8IU89 383 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 CCAR1Q8IX12 1150 aaKnown RBP7.79□□□□□ -1.16
TCF4-228ENST00000565393 NKX2-3Q8TAU0 364 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 ZBTB40Q9NUA8 1239 aa7.79□□□□□ -1.16
TCF4-228ENST00000565393 PCNTO95613 3336 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 USP17L10C9JJH3 530 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 GH2P01242 217 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 TFRCP02786 760 aaKnown RBP7.78□□□□□ -1.16
TCF4-228ENST00000565393 GCLCP48506 637 aaPredicted RBP7.78□□□□□ -1.16
TCF4-228ENST00000565393 BACE1P56817 501 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 IRX3P78415 501 aaPredicted RBP7.78□□□□□ -1.16
TCF4-228ENST00000565393 JAG1P78504 1218 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 RAB3GAP1Q15042 981 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 CERKLQ49MI3 558 aaPredicted RBP7.78□□□□□ -1.16
TCF4-228ENST00000565393 SH3D19Q5HYK7 790 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 SIRT2Q8IXJ6 389 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 SLAIN1Q8ND83 568 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 DPF3Q92784 378 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 P2RX7Q99572 595 aaKnown RBP7.78□□□□□ -1.16
TCF4-228ENST00000565393 WDR18Q9BV38 432 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 CRNKL1Q9BZJ0 848 aaKnown RBP7.78□□□□□ -1.16
TCF4-228ENST00000565393 ASCC2Q9H1I8 757 aaPredicted RBP7.78□□□□□ -1.16
TCF4-228ENST00000565393 BOLA2Q9H3K6 86 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 CABP5Q9NP86 173 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 GINM1Q9NU53 330 aa7.78□□□□□ -1.16
TCF4-228ENST00000565393 RFX7Q2KHR2 1363 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms